ENST00000522213.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000522213.1

Source

Gencode19

Same with

lnc-MFHAS1-1:1,NONHSAT124887

Classification

intergenic

Length

666 nt

Genomic location

chr8-:8581203..8639989

Exon number

4

Exons

8581203..8581244,8611510..8611618,8614686..8614826,8639616..8639989

Genome context

Sequence
000001 ACTAGTTGAA TGTTCCTAGA AGGTCCTATA CCAGTCAAGC GCCGTCCTTT TGCCTCTTAA TGCGCATGCT TCAGCCCACG 000080
000081 CACCCAAATC CTGAGCTCTT ATCCGAAAGC TGCTGATCAC CAGCTTCAGG TGTTTTCTGT CTGTTGGGAG CCTGCCTTTC 000160
000161 CCTGGCACCG GCTGTCACCA ATTATTTTAG AGAGACAGTG TAACAACCAC CTGACCATCT CACCTGATGG TTGCTGGGGG 000240
000241 GCGTTCTTCT GCCCTGCTTA TGTGTGCCTG ACTACCTACT GTAACAAGAG GAGCCCTGCC CTGAAGACAG CGCAATACAG 000320
000321 GGAAGAAGGG ATCGCTTCAG ACCAGGAGGG CCTCACTGCA AGACTCCTGA CAAGCTGATC TGATTTATCT TCCTATGTAT 000400
000401 CTGATGAATG GTTTATCCAG GGACTGGCAA AAGGAGAAAA ACAAGATGCA GAGGAATGAG ACTGAGAGTA CCACAGTGTG 000480
000481 AACAGTTTCC CCAAAGTGCT TCATTTTGGC TCCAGGCTGG AGTGCACCTC ATAGCTCGAT GTGTGGTCAT GGCTCACTGC 000560
000561 AGCCTCAAAC TCCCAGGCTC AAGGGATCCT CCCACCTCAG CCTCCTGAGT ATCTGGGACT ACAGATTACC CAGAGCTCCT 000640
000641 AGGGAAACTG AGCCCGCACC TCGCGC
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Predicted Small Protein

Name ENST00000522213.1_smProtein_407:607
Length 67
Molecular weight 7356.6182
Aromaticity 0.0606060606061
Instability index 52.2196969697
Isoelectric point 10.8596801758
Runs 7
Runs residual 0.0445472690982
Runs probability 0.0495369318898
Amino acid sequence MVYPGTGKRRKTRCRGMRLRVPQCEQFPQSASFWLQAGVHLIARCVVMAHCSLKLPGSRD
PPTSAS
Secondary structure LLLLLLLLLLLLLLLLLEEELLLLLLLLLLHHHHHHHLLEEEEEEEEEEEEELLLLLLLL
LLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
LLLLLL
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