ENST00000522213.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000522213.1 |
Source |
Gencode19 |
Same with |
lnc-MFHAS1-1:1,NONHSAT124887 |
Classification |
intergenic |
Length |
666 nt |
Genomic location |
chr8-:8581203..8639989 |
Exon number |
4 |
Exons |
8581203..8581244,8611510..8611618,8614686..8614826,8639616..8639989 |
Genome context |
|
Sequence |
000001 ACTAGTTGAA TGTTCCTAGA AGGTCCTATA CCAGTCAAGC GCCGTCCTTT TGCCTCTTAA TGCGCATGCT TCAGCCCACG 000080
000081 CACCCAAATC CTGAGCTCTT ATCCGAAAGC TGCTGATCAC CAGCTTCAGG TGTTTTCTGT CTGTTGGGAG CCTGCCTTTC 000160 000161 CCTGGCACCG GCTGTCACCA ATTATTTTAG AGAGACAGTG TAACAACCAC CTGACCATCT CACCTGATGG TTGCTGGGGG 000240 000241 GCGTTCTTCT GCCCTGCTTA TGTGTGCCTG ACTACCTACT GTAACAAGAG GAGCCCTGCC CTGAAGACAG CGCAATACAG 000320 000321 GGAAGAAGGG ATCGCTTCAG ACCAGGAGGG CCTCACTGCA AGACTCCTGA CAAGCTGATC TGATTTATCT TCCTATGTAT 000400 000401 CTGATGAATG GTTTATCCAG GGACTGGCAA AAGGAGAAAA ACAAGATGCA GAGGAATGAG ACTGAGAGTA CCACAGTGTG 000480 000481 AACAGTTTCC CCAAAGTGCT TCATTTTGGC TCCAGGCTGG AGTGCACCTC ATAGCTCGAT GTGTGGTCAT GGCTCACTGC 000560 000561 AGCCTCAAAC TCCCAGGCTC AAGGGATCCT CCCACCTCAG CCTCCTGAGT ATCTGGGACT ACAGATTACC CAGAGCTCCT 000640 000641 AGGGAAACTG AGCCCGCACC TCGCGC |
Predicted Small Protein
Name | ENST00000522213.1_smProtein_407:607 |
Length | 67 |
Molecular weight | 7356.6182 |
Aromaticity | 0.0606060606061 |
Instability index | 52.2196969697 |
Isoelectric point | 10.8596801758 |
Runs | 7 |
Runs residual | 0.0445472690982 |
Runs probability | 0.0495369318898 |
Amino acid sequence | MVYPGTGKRRKTRCRGMRLRVPQCEQFPQSASFWLQAGVHLIARCVVMAHCSLKLPGSRD PPTSAS |
Secondary structure | LLLLLLLLLLLLLLLLLEEELLLLLLLLLLHHHHHHHLLEEEEEEEEEEEEELLLLLLLL LLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL LLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooo oooooo |