ENST00000522265.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000522265.1 |
Source |
Gencode19 |
Same with |
lnc-TTPA-1:3,NONHSAT126935 |
Classification |
intergenic |
Length |
562 nt |
Genomic location |
chr8-:64326191..64382757 |
Exon number |
4 |
Exons |
64326191..64326275,64329661..64329851,64374037..64374101,64382537..64382757 |
Genome context |
|
Sequence |
000001 ACTCCTATTG ACCCCCTGGC ATATTTATAG CCTCTCTCTT TCTGCTGAGA CTGGTAGTTT TCACCTTCCC TTCCCTGTGT 000080
000081 TGTGTTTATT CAGCAGCACG CTAAATCACA CCCGGGCACA AGTGGAGCAT TCATCAGGAA CCACGAGCCC CTCTTTCAGT 000160 000161 CTGCCAAACC TATCCAATTA CTGGGGCTGG AAGAGCCTGC ACAAACCCTT CTGCCAGGCA AATGAACCTT CTTGCTGTGA 000240 000241 TTCATAAACA TGGCTGTACC TCTAAATAGA CTGGGACTTC CTTTTGTTAA GAAGCCAAAT AAGATATCAT TTACATCAAA 000320 000321 AATGAAAAAA TAAGGGGGCA TCTACTTTCT ATAATAACGA CCTGGGAAAC TCAGACCATC CTTCCTTCTG AGGACGCTGA 000400 000401 AAAAAACTGA ATCCAAGAAC TAACAACATA TTAAGGAACT GCCAGGTGGT GACCCAGCAT GCTAAGAACA CAGCAAGGAA 000480 000481 TTCGAAGTTG TTTTAACATT AGAAAATCAA CTGATGTGAT TCAGCACATT TACTGAATAT TATGATGACC TGGGCAGAGT 000560 000561 CA |
Predicted Small Protein
Name | ENST00000522265.1_smProtein_458:535 |
Length | 26 |
Molecular weight | 3008.4802 |
Aromaticity | 0.08 |
Instability index | 84.364 |
Isoelectric point | 10.0442504883 |
Runs | 6 |
Runs residual | 0.0316981132075 |
Runs probability | 0.0152505446623 |
Amino acid sequence | MLRTQQGIRSCFNIRKSTDVIQHIY |
Secondary structure | LLLLLLLLLLLLLEELLLLHHHEEL |
PRMN | - |
PiMo | - |