ENST00000522622.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000522622.1

Source

Gencode19

Same with

lnc-FAM110B-7:1

Classification

intergenic

Length

2971 nt

Genomic location

chr8+:58173785..58179172

Exon number

3

Exons

58173785..58173898,58174093..58175676,58177900..58179172

Genome context

Sequence
000001 ATTACCTTCC GAGGTGCCAG TGCGCGCTGG GGCCCAATGG CTCTGCTCCG TATATTTCTT CTCCGAGAGT TTGGAGACGT 000080
000081 CCCTCTCAGA GAAGCTGGAG GGTCCCTGTC TGAGACCCCA GATGAGGATC TGGAATATCC ACAAAGCTGC GTCCAGGGGA 000160
000161 ACGCGTGGAA GCTGCAGCGG AGCCTCCTGC TCAAGAGAAA AGGCCAGTCT GAAACCTACA AGAAGAACAT GTGTCGGGAA 000240
000241 CTGCGGGCTG TGGGCTGGGG GCTACTGGAG GAGGTGGGCA GGTGGGGAGA AGCACCCCCT TCAGAGCTGG GGGCTTGGGG 000320
000321 AGTGGGGGCG AGGGGAGGCT TGGAAAGAAT GGAGTGTGTG GGGCGGGCCG TCCTGGTCCC CAGGGCGCTG GGCTTTCTTC 000400
000401 CCTGGCAGAC TCCGCAGCGC CTGAGATGTG GACGCCTTGG AGGCGGAGGG CCCAAGTCAT CTTTATGAGC AGCAAAAGAA 000480
000481 ACCCAAAACT TTAGCTGGTT TCTCCACCCA CAGTTCCTCT TACAGAGCAC TTCAGAGAGA ATTTTAAAGC GGTATAACAA 000560
000561 AATTAAGTAT ATACTGTGTT TTATTTTTAA TGTACACATT TTAAAAGATA ATATTAGATA CATTATAGAA AGGAACGTAA 000640
000641 TGAAAGAAAT AATTCCCATA ATATATCACC TTCTGGGCTA AAAATTCTTT GGCTAAAATC CAATATTTAT TTTATATTAA 000720
000721 TGAATGCCTA CATAAATATG TTCTTTACTG AGGGAGCTTA GAAGGACACT TTGAAGTGGG AAGATGGTTC ATGTTCTTGA 000800
000801 ATAAGAAGAC TCATTTTTCT CAAGATGTGA GCTCTTTATC AATTTTACAT AAACCAAATA AAGCTATCAA AATTTTTAAC 000880
000881 GTTTTTGAAT TACACATGCT TTCACTATTG TGATGACATT AAGAAAATTT TTGTAACGGT TAAAAAAGTC TTACCTTTCT 000960
000961 AGATATCAAA TGTGCTATTG ATTTCCACAA ATAGTTTGCT AACAGCTGAA AAGATAGATA AATGAATACA AGAGAATAGA 001040
001041 AAATCCAGGG ACACTCAAAT ATATGTAAGA ATTCAGAACT TGATAATGGT GATACTTTGT ACTAGTAGGA AAAGATGAAT 001120
001121 TATTTTCATT AATGAAAGGC CTGCTTTTTG GAGGAAACTA GCTAGATTTT TATGCCACAA AAATAAGTTC CTCATACAAT 001200
001201 ATAGACTGAA AATTTTAAAT ATGTAAGATG AGAGAAACAT CAGAAGAAAA CACAAATGCC TTATTTATAC AGAAGCATTT 001280
001281 TTGTGTTGAC AAAAACCTGT CTAAGAAGCT CACAAGCAAG CCTTCTGAAG GTTGATCTAG CAAAATAAAA TTAAATCACC 001360
001361 CTATAATAAC AAAAAATAAC AAAACATAAG GTAACATAAA ATATTTACCA TATGTGTATA CATATTAGAT TAAATATGGA 001440
001441 TTTTCATTTT ACAGAGAATT ATTTCAAATC AGCCTGAAAC AAAAAAGACT CTAATTTAAC ATTGAGCAAA GCAGTTCTTT 001520
001521 CAGATCTGCA AGTGACCTAT GCTCATAGGA AAAAATATTT TGTGTTCTTG GTAAGAGAAG GAATTTAAAA GAGGTATAAA 001600
001601 ATATTGTTTT CTGTCCACAA ATTTTGTGAA GATGAAAAAC AGTGATATTA TACTGCTGCT TAAAGTTGCT GATGGCCTTT 001680
001681 CAAATGGACA ATTTGGTGCT CTGATGGCTG GGAAGTCCAA GGTTACAGGG CTTATCTGGT GAGGATCTTT TCCCTGGTGG 001760
001761 GGACTCTACA GAGTCTCAGG GTAGTGCTGG GTATTACTTG GTGGTGGCCT CACAAGAGAC AACCAGGAAT GAATTAATCC 001840
001841 ATTCATAAGG GCTTGGCCTC CCAAAGGTTC TACCTCTCAA AAGTTCTCCC TCTCAAAGTT TCTACTAGTC ACTTCCCAAA 001920
001921 GGTTCTACCA GTCACTTCGC AAAGGTTCTA CCTCTCAACA CTGCTACCTT GGGGGACAAA GTTTTCAACA CATGAACTTT 002000
002001 TGGGGAACAC ATTCAAACCA TATCACCACT TTAGCTGTCT TGGCTACTAT CTGCACCTTT TATGTTCAAC CCATGTATAT 002080
002081 CTTTGAATCT ATTGTGTGTC TCTTATAAAT AATATATATA GTTGGATCAC ATTTTTCTTA TCAGTCTGAC AATCTCTGCC 002160
002161 TTTTGATTGT ATTGTTTAAT CCATTCACAT TTAATGTTAC TATGATATGC TTGGATTTAC TTCTATTTTC CTTTTTATTT 002240
002241 TTAACGTTTC ATGTATTTTT TAATTCTTTT ATTCCTTCTT TACTGCTTTT TCATCAAGTG AATATTTAAA AAGTTAACGA 002320
002321 AACTCAAAGA TTCTTGTACT TAGGAGAATG GATGTTTTTA TACTTTTTTG GTAAACGTAC ATCACATATA ATACTACCTT 002400
002401 CCTGGCCTAC TTCACAGAAT GATGTGGAAA TCAGTGAGAC AGTATGAGAC AGAGACTGAG AAACCACAAA GTATTGTTTC 002480
002481 TAATTAAGTA CTGGAGCAAT GTTTAAAAAT CAGTGTGAGA TGGGCATGGT AGCTTACGCC TGTAATCCCA GCACTTTGAG 002560
002561 AGGCTGAAGA GGGTGGATCA TGAGGTGAGG TCAAGAGATC GAGACCAGCC TGGCCAACAT AGTAAAACCT CATCTCTACT 002640
002641 AAAAATACAA AAATTAGGCA TGGTGGTGCA CGCCTGTAGT CCCAGCTACT TGGGAGGCTG AGGCAGAAGA ATCGCTTGAA 002720
002721 CCTGGGAGGT GGAGGTTGTG GTGAGGCGAG ATAGTGCCAC TGCACTTCAG CTTGGGCAAC AGAGTGATAC TCCATCTCAA 002800
002801 AAAAAAAATT AGGGTGAAAT TAAGTAGTAG TGTTTTACAA AAAATGAATT TTGAAAGGGT GTGTGTACGT GTTTAGGTCA 002880
002881 TGCTTTTTTG GGCTAGTTAG TATGAAATCT ATTTACCTAA ATTCTGTAAG ACTACTTAAA ATGTTTATTA AATTTTGAAA 002960
002961 TTCATGTAAC A
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Predicted Small Protein

Name ENST00000522622.1_smProtein_1991:2107
Length 39
Molecular weight 4379.148
Aromaticity 0.157894736842
Instability index 50.0055263158
Isoelectric point 5.93951416016
Runs 6
Runs residual 0.014716066482
Runs probability 0.0264970853206
Amino acid sequence MNFWGTHSNHITTLAVLATICTFYVQPMYIFESIVCLL
Secondary structure LLLLLLLLHHHHHHHHHHHHHHHEELLHHHHHHHHHHL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLL
PiMo oooooooooooooTTTTTTTTTTTTTTTTTTTiiiiii