ENST00000523502.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000523502.1 |
Source |
Gencode19 |
Same with |
lnc-ADCY8-2:1,NONHSAT129159 |
Classification |
intergenic |
Length |
2072 nt |
Genomic location |
chr8-:131607545..131667958 |
Exon number |
3 |
Exons |
131607545..131609237,131611093..131611317,131667805..131667958 |
Genome context |
|
Sequence |
000001 CATATTTCAA TCAGCAGATG GAGAAAAGAA GATTACCCTT CCCAATGTGG GTGGAAGTAA CCTAGTCAAC TGAAGGCCAG 000080
000081 ACCAGAACTT ACATCATTGG CTCTCCTGAG TCTCCAGCTT GCCGGCTGCT AATCTTGGGA TTTCTCCATG TCATGCCCTA 000160 000161 TCTCCAAATA CAGTCACATT CTGGGACCGC AGATTATGAA CACAGGAATG TTTTGACACT GGAGACTGTG GAGGGAACTC 000240 000241 AGCCCAGGGT CTGATTGGTG TCAGGCTCTG TACATGGACA CTGTGGTGGA GGTAATTACC TGCAGCTCTA GGAGCACCCA 000320 000321 GAGAACAAAG TCATTAACTC ATTAGGCCAG AAGGAGACTA GGAAGACTCC ACAGAGAAGG CTATAAGGAA ACATTGCACA 000400 000401 GGAGCGGCAG GGCAGGAAGC GTGCTTTATG AAGATTTACC CGGCAGCAGG TGTGAAATTG GCAGAAGAGA CAGGAGGATG 000480 000481 ACGCTGAGAA GTGAAGGGCT TGAGGCATAA AACAGTTAAC AAACTGTTGA AGCTGTCTTG GGGAGAGGTA ATTAATTCTG 000560 000561 CTCAGCTGTT AGTTGGTGTT CTGACTGTAC ACATTTAGAA TGATGGGCTT TGACAGGCCC AATGTTGTTT TGCAGTATAA 000640 000641 ATGGTAAAAT AGTCATTTCA TAGAAAAATC AACACGGAAT CTTTTTGCCT AATTGATCCC TAAGCTCCTG ACTTTTGCCT 000720 000721 CTGCCCCCAG CACTGCTCCC CTTGAATCAC GCCCTCTCCG CATCCTCTCC TCACCCCTTG CTTCACTGCC CAGGCTTCTC 000800 000801 CCTCTTAGGG CAAATACCAT GAACATGTAG TTGTTATTAG TTGACATTGT GTGGCTGAAG GCCAGTGAAT AATTACATCC 000880 000881 ATCTCATCTC ACCTGTCTCC CATGGCACCG ACCAGAGACA TCAGGCACAG GCAACCATCT CCAGAGTACA TCAGCCCCTC 000960 000961 GGGGACCTGC TCAGGTTGGC TGAATCTCTG CCTCAGTGAC ACATTTTGTG CTGAGCTGTG AGAATTGCTT GGGAACCAAG 001040 001041 AGCTGCTGGC AGAAGGGCTA ACTCTCAACA GCAGGAAACT TCCCATGGCA GAGGGCCCCC GCAATGGCAA CCCCGTGCCT 001120 001121 TCTGAGCTGG AGATGCCTCG CTGCCTGACC ACATGGCACC ATGAGTCTCT AGCTCCCACC ACCACCCCAA ATCCTCACCC 001200 001201 TCAGGGCTCG GGCCCAGGTG CACAGGCCTG AGAGCTGGCA GAAAGGGAGT TGTCTACAGC CAGAAGGGGA TTTTCTTCAC 001280 001281 CATCCCACCC AAACGTTGTT TGGCTGCCGC TGCCTCTGAG CTTTTCAGAA ATGAAAAAGA GAGATAGGGA AGTGGGAGCC 001360 001361 CTGGTGGGCT CTGGAACCCT TCTGTTTTCT CAAGGGCATG GCAGTAGGTC CAAAATGTCC TCTGGGTTTG AAAATGAAAT 001440 001441 GCCGGCACAG AGCAGATTCC TGACAAATGT GGCCCAGATG TTTCTGAGCG ATTTATTTTT GCTGATGGAA AATGGCTGAG 001520 001521 CTAATAACCC TCAGAAACAT TTCTGTAGGG AGAGTTGAAG CCTATTTTGC CTCTGTGCTT GTGTTTTGCT TGTGGTTTTC 001600 001601 TTTTACGGAA GAAATTAGAT GTAGGAAAAA GCCCAAAAAA CAACTCTGTC TATAACAGCT GATGCCAAAA TCCCATGCAT 001680 001681 AGATTGTGTG ACCTGATTTC TACCAATTAT TGACAATTCA GTGAGGCCCA AGTTCTTCTC ATCAATTACC TCATTTAATC 001760 001761 CCTATGACAA GGAGGAGACC AAGGCTCAGA GCAATGACAT TTCCTACCCA GCCAGAGCCA CACGGCCTGT GACAGCATGG 001840 001841 CTGAGAATCA AACCCCAAGC TTTGACTCTA GATCAAAACT CTTTCCACCA CTATACTCTT ATAGGGAAAT GACAAGGAAA 001920 001921 ATACAAGGGT TAAAAGAGAC TCTGAGAGGC TGGATGCAGT GGCTCACACG TGTACTTTGG GAGGCCAAGG TGGGTGGATT 002000 002001 ACTTCAGGCC AGGAGTTCGA GACCAGCCTG GCCAATATGA CAAAACCCCG CCTCTACAAA AAAAAAAAAA AA |
Predicted Small Protein
Name | ENST00000523502.1_smProtein_1511:1654 |
Length | 48 |
Molecular weight | 5538.6204 |
Aromaticity | 0.127659574468 |
Instability index | 58.470212766 |
Isoelectric point | 9.35223388672 |
Runs | 8 |
Runs residual | 0.00393617021277 |
Runs probability | 0.046623829712 |
Amino acid sequence | MAELITLRNISVGRVEAYFASVLVFCLWFSFTEEIRCRKKPKKQLCL |
Secondary structure | LLEEEELLLLLLLHHHHHHHHHHHHHHHHLLLHHHEEELLLLLLLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii |