ENST00000523502.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000523502.1

Source

Gencode19

Same with

lnc-ADCY8-2:1,NONHSAT129159

Classification

intergenic

Length

2072 nt

Genomic location

chr8-:131607545..131667958

Exon number

3

Exons

131607545..131609237,131611093..131611317,131667805..131667958

Genome context

Sequence
000001 CATATTTCAA TCAGCAGATG GAGAAAAGAA GATTACCCTT CCCAATGTGG GTGGAAGTAA CCTAGTCAAC TGAAGGCCAG 000080
000081 ACCAGAACTT ACATCATTGG CTCTCCTGAG TCTCCAGCTT GCCGGCTGCT AATCTTGGGA TTTCTCCATG TCATGCCCTA 000160
000161 TCTCCAAATA CAGTCACATT CTGGGACCGC AGATTATGAA CACAGGAATG TTTTGACACT GGAGACTGTG GAGGGAACTC 000240
000241 AGCCCAGGGT CTGATTGGTG TCAGGCTCTG TACATGGACA CTGTGGTGGA GGTAATTACC TGCAGCTCTA GGAGCACCCA 000320
000321 GAGAACAAAG TCATTAACTC ATTAGGCCAG AAGGAGACTA GGAAGACTCC ACAGAGAAGG CTATAAGGAA ACATTGCACA 000400
000401 GGAGCGGCAG GGCAGGAAGC GTGCTTTATG AAGATTTACC CGGCAGCAGG TGTGAAATTG GCAGAAGAGA CAGGAGGATG 000480
000481 ACGCTGAGAA GTGAAGGGCT TGAGGCATAA AACAGTTAAC AAACTGTTGA AGCTGTCTTG GGGAGAGGTA ATTAATTCTG 000560
000561 CTCAGCTGTT AGTTGGTGTT CTGACTGTAC ACATTTAGAA TGATGGGCTT TGACAGGCCC AATGTTGTTT TGCAGTATAA 000640
000641 ATGGTAAAAT AGTCATTTCA TAGAAAAATC AACACGGAAT CTTTTTGCCT AATTGATCCC TAAGCTCCTG ACTTTTGCCT 000720
000721 CTGCCCCCAG CACTGCTCCC CTTGAATCAC GCCCTCTCCG CATCCTCTCC TCACCCCTTG CTTCACTGCC CAGGCTTCTC 000800
000801 CCTCTTAGGG CAAATACCAT GAACATGTAG TTGTTATTAG TTGACATTGT GTGGCTGAAG GCCAGTGAAT AATTACATCC 000880
000881 ATCTCATCTC ACCTGTCTCC CATGGCACCG ACCAGAGACA TCAGGCACAG GCAACCATCT CCAGAGTACA TCAGCCCCTC 000960
000961 GGGGACCTGC TCAGGTTGGC TGAATCTCTG CCTCAGTGAC ACATTTTGTG CTGAGCTGTG AGAATTGCTT GGGAACCAAG 001040
001041 AGCTGCTGGC AGAAGGGCTA ACTCTCAACA GCAGGAAACT TCCCATGGCA GAGGGCCCCC GCAATGGCAA CCCCGTGCCT 001120
001121 TCTGAGCTGG AGATGCCTCG CTGCCTGACC ACATGGCACC ATGAGTCTCT AGCTCCCACC ACCACCCCAA ATCCTCACCC 001200
001201 TCAGGGCTCG GGCCCAGGTG CACAGGCCTG AGAGCTGGCA GAAAGGGAGT TGTCTACAGC CAGAAGGGGA TTTTCTTCAC 001280
001281 CATCCCACCC AAACGTTGTT TGGCTGCCGC TGCCTCTGAG CTTTTCAGAA ATGAAAAAGA GAGATAGGGA AGTGGGAGCC 001360
001361 CTGGTGGGCT CTGGAACCCT TCTGTTTTCT CAAGGGCATG GCAGTAGGTC CAAAATGTCC TCTGGGTTTG AAAATGAAAT 001440
001441 GCCGGCACAG AGCAGATTCC TGACAAATGT GGCCCAGATG TTTCTGAGCG ATTTATTTTT GCTGATGGAA AATGGCTGAG 001520
001521 CTAATAACCC TCAGAAACAT TTCTGTAGGG AGAGTTGAAG CCTATTTTGC CTCTGTGCTT GTGTTTTGCT TGTGGTTTTC 001600
001601 TTTTACGGAA GAAATTAGAT GTAGGAAAAA GCCCAAAAAA CAACTCTGTC TATAACAGCT GATGCCAAAA TCCCATGCAT 001680
001681 AGATTGTGTG ACCTGATTTC TACCAATTAT TGACAATTCA GTGAGGCCCA AGTTCTTCTC ATCAATTACC TCATTTAATC 001760
001761 CCTATGACAA GGAGGAGACC AAGGCTCAGA GCAATGACAT TTCCTACCCA GCCAGAGCCA CACGGCCTGT GACAGCATGG 001840
001841 CTGAGAATCA AACCCCAAGC TTTGACTCTA GATCAAAACT CTTTCCACCA CTATACTCTT ATAGGGAAAT GACAAGGAAA 001920
001921 ATACAAGGGT TAAAAGAGAC TCTGAGAGGC TGGATGCAGT GGCTCACACG TGTACTTTGG GAGGCCAAGG TGGGTGGATT 002000
002001 ACTTCAGGCC AGGAGTTCGA GACCAGCCTG GCCAATATGA CAAAACCCCG CCTCTACAAA AAAAAAAAAA AA
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Predicted Small Protein

Name ENST00000523502.1_smProtein_1511:1654
Length 48
Molecular weight 5538.6204
Aromaticity 0.127659574468
Instability index 58.470212766
Isoelectric point 9.35223388672
Runs 8
Runs residual 0.00393617021277
Runs probability 0.046623829712
Amino acid sequence MAELITLRNISVGRVEAYFASVLVFCLWFSFTEEIRCRKKPKKQLCL
Secondary structure LLEEEELLLLLLLHHHHHHHHHHHHHHHHLLLHHHEEELLLLLLLLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
PiMo oooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii