ENST00000523626.2

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000523626.2

Source

Gencode19

Same with

lnc-USP35-1:4,NONHSAT023258

Classification

antisense

Length

555 nt

Genomic location

chr11+:77850839..77885023

Exon number

3

Exons

77850839..77851118,77860023..77860139,77884866..77885023

Genome context

Sequence
000001 GCAGGCGTTT GTAGCCACTT TTAAGTTTTA TCAGCTAGTT CATGCTTGCG TTGAAAGAGT GGTCGTTTGC GCTGGGTCAT 000080
000081 CACTGTGTAG TATTGGGGAT ACTTAGGTGA GAAAAAAACT TAACGCTAGA GACGTTCACG CACTAGTGGA GAAGCCAGGA 000160
000161 TTGTTGCCCT AGAGTTACAG TAGATAAAAG TACCTCAGAG AACTGCGGGG GCTCCCAACC TGGACGCTTG CACCGGAGTA 000240
000241 TTAAATCCAG CTAGAGAATG GCATGTGCAA AGATACAGAG GGTCTCGCTC TGTATCCCAG GCTGGAGTTC AGTGGCACGA 000320
000321 TCTCCGCTCG CTGCAACCTC CGCCTCCTGG GTTCAAGTGA TTCTCCTGCC TCAGCCTCCC AAGTAGCTGG ATTACAGAGC 000400
000401 ATGTGGGTGA GAAGAATCGA TGCAGAAGCC ATCGCTCAGA GCGATTTTCA GTACCTCTTC CACGAAGACC TGGAAGCTGT 000480
000481 TGATCTGCTT GTTGGCGGGC ACCACCCAGA GCCTCTTGAG GTTCTGCTTG GTGTACTCCT CCTCTGGCAG GCCCT
[back to top]

Predicted Small Protein

Name ENST00000523626.2_smProtein_257:385
Length 43
Molecular weight 4462.3101
Aromaticity 0.047619047619
Instability index 68.0142857143
Isoelectric point 10.1056518555
Runs 7
Runs residual 0.00949367088608
Runs probability 0.0409821586292
Amino acid sequence MACAKIQRVSLCIPGWSSVARSPLAATSASWVQVILLPQPPK
Secondary structure LLLLEEEEEEEELLLLLLLLLLHHHHLLLLLLEEEELLLLLL
PRMN -
PiMo -