ENST00000523626.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000523626.2 |
Source |
Gencode19 |
Same with |
lnc-USP35-1:4,NONHSAT023258 |
Classification |
antisense |
Length |
555 nt |
Genomic location |
chr11+:77850839..77885023 |
Exon number |
3 |
Exons |
77850839..77851118,77860023..77860139,77884866..77885023 |
Genome context |
|
Sequence |
000001 GCAGGCGTTT GTAGCCACTT TTAAGTTTTA TCAGCTAGTT CATGCTTGCG TTGAAAGAGT GGTCGTTTGC GCTGGGTCAT 000080
000081 CACTGTGTAG TATTGGGGAT ACTTAGGTGA GAAAAAAACT TAACGCTAGA GACGTTCACG CACTAGTGGA GAAGCCAGGA 000160 000161 TTGTTGCCCT AGAGTTACAG TAGATAAAAG TACCTCAGAG AACTGCGGGG GCTCCCAACC TGGACGCTTG CACCGGAGTA 000240 000241 TTAAATCCAG CTAGAGAATG GCATGTGCAA AGATACAGAG GGTCTCGCTC TGTATCCCAG GCTGGAGTTC AGTGGCACGA 000320 000321 TCTCCGCTCG CTGCAACCTC CGCCTCCTGG GTTCAAGTGA TTCTCCTGCC TCAGCCTCCC AAGTAGCTGG ATTACAGAGC 000400 000401 ATGTGGGTGA GAAGAATCGA TGCAGAAGCC ATCGCTCAGA GCGATTTTCA GTACCTCTTC CACGAAGACC TGGAAGCTGT 000480 000481 TGATCTGCTT GTTGGCGGGC ACCACCCAGA GCCTCTTGAG GTTCTGCTTG GTGTACTCCT CCTCTGGCAG GCCCT |
Predicted Small Protein
Name | ENST00000523626.2_smProtein_257:385 |
Length | 43 |
Molecular weight | 4462.3101 |
Aromaticity | 0.047619047619 |
Instability index | 68.0142857143 |
Isoelectric point | 10.1056518555 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0409821586292 |
Amino acid sequence | MACAKIQRVSLCIPGWSSVARSPLAATSASWVQVILLPQPPK |
Secondary structure | LLLLEEEEEEEELLLLLLLLLLHHHHLLLLLLEEEELLLLLL |
PRMN | - |
PiMo | - |