ENST00000523775.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000523775.1 |
Source |
Gencode19 |
Same with |
lnc-C8orf56-2:1,NONHSAT128167 |
Classification |
antisense |
Length |
583 nt |
Genomic location |
chr8-:104240653..104241542 |
Exon number |
2 |
Exons |
104240653..104240988,104241296..104241542 |
Genome context |
|
Sequence |
000001 CACAACTTTA GTCCTATCTT TCCCAATCCC AGGCATGTTA ACAATCCTTG AAAAATCATG CTACATTACT TTGGAGGAAA 000080
000081 ATACTTCCAG ATGAACATGT TTCAAGACAT ACTAGAAAAT TATTCCTATC AAAACATCCT TTTTCTGTGT CAGCTACCTC 000160 000161 ATTTCTAATG CAGTGCACAT CAATCTAATG TCAGTATGAA TACACATCAA CCAGGTGCTG GCTTTCTAAA GTGATTCCTT 000240 000241 TGCAGATATG AGGAGCAGGT ATGACTGCTT CACAGACACC TCCCAAAGAC ATGCCATGGG CAGTGGGTTG GTGCATGGGA 000320 000321 AACTGGATCC GATCTGTCTC ATACCAAGCT AAGGAAACAA GGATAACAAG GAGTTTTCCT GTACCTTGAT TTTTTCAATA 000400 000401 TGTGGGTTTA GAGTTGGATG AAAGCCAGCT TTTAAGTGAA CCTGGTAAGA TTTGTAATGA CAATATTTAA AATGAAAGAA 000480 000481 GGAAAGAATA AGCTTGCCTG AAACAGAATA CACTATCATG GGCAGGAGAG TTATAGCACT AAGGTGTGAC TCTTTCACCC 000560 000561 AGAAAATGCA TTCCTACTTT TCT |
Predicted Small Protein
Name | ENST00000523775.1_smProtein_260:388 |
Length | 43 |
Molecular weight | 4812.5323 |
Aromaticity | 0.119047619048 |
Instability index | 63.3142857143 |
Isoelectric point | 9.77899169922 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0494359906124 |
Amino acid sequence | MTASQTPPKDMPWAVGWCMGNWIRSVSYQAKETRITRSFPVP |
Secondary structure | LLLLLLLLLLLLHHHLLLLLLEEEEEEEEELLEEEEEELLLL |
PRMN | - |
PiMo | - |