ENST00000523935.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000523935.1 |
Source |
Gencode19 |
Same with |
lnc-FZD3-1:1,NONHSAT125733 |
Classification |
antisense |
Length |
443 nt |
Genomic location |
chr8+:28304781..28313204 |
Exon number |
3 |
Exons |
28304781..28305081,28306471..28306548,28313141..28313204 |
Genome context |
|
Sequence |
000001 TTTTCTTCTT CTGTAAATTG GAAAGCAGTG GGAAAATTAC AAAGTATCTT TTTAAAACTC AGGTGGTTTG CATAGCTATT 000080
000081 TGTCTGTTTG AGTTTGTTGT TCCTGTGATT TAAAAGATTG TCTCCACTTA ACTGGAAATA AGCCAAATGT CTATCAATAG 000160 000161 AGAACTGGTT GCATCAACTC CTGCATCTCC ACACAATGCA GTACTATGAG CTGCAAATGG AAAGCAGGAT GTTTCTATAT 000240 000241 TCAACTGTGG AAGGATCTCC AGGATATACT GTTACATTAA GAAAGAAGGG TGGATGAGAC GGAAAAGTTT GCCTGATGTA 000320 000321 ATGGATCTAG GCGATGAGTA TCCATGGCTA CCAACACGAG ACAGACAACC AGAAATGATC CTGAGCTTCA GCTATTGCTC 000400 000401 CCTAACTGAG AATGAGATGC AAGAGAAGTC TCACTAGGAA AGG |
Predicted Small Protein
Name | ENST00000523935.1_smProtein_293:436 |
Length | 48 |
Molecular weight | 5661.3626 |
Aromaticity | 0.0851063829787 |
Instability index | 52.5787234043 |
Isoelectric point | 4.83465576172 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0318091200444 |
Amino acid sequence | MRRKSLPDVMDLGDEYPWLPTRDRQPEMILSFSYCSLTENEMQEKSH |
Secondary structure | LLLLLLHHHHLLLLLLLLLLLLLLLLEEEEEEEELLLLHHHHHHLLL |
PRMN | - |
PiMo | - |