ENST00000524338.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000524338.1 |
Source |
Gencode19 |
Same with |
lnc-PENK-2:1 |
Classification |
intergenic |
Length |
561 nt |
Genomic location |
chr8-:57432937..57472382 |
Exon number |
2 |
Exons |
57432937..57433126,57472012..57472382 |
Genome context |
|
Sequence |
000001 ATGTTTGCCA AAGAGTGCAA AGTTTCAGTT ACATGGGAGG AATCAGTTCT GGTGGTTTAT TGCAAAACAT GGTGACTATA 000080
000081 GTTAATGTAC TATGTATTTC AAAACATCTA AAAGAAAAGA TTTTAAGTGT TCTCACTACA AAGCAATGAT AAATATTTGA 000160 000161 GATGCTGAAC TTTTTAATAC TTACATTCTT AAGTTTTTCA AGGCTTTTCT AATAAGTCTG GCATTCCTGC CCTTGGCAGT 000240 000241 GTGAGATGGA AGATGATGTC GCAAGGGTGG CCGAGAAGCA GCTGGGCTGA GCTGCTAAAA GCACAGAGAC CGGGGCCAGA 000320 000321 CTCCTCAGCC TGAAATCCTG CTTCCACTAA GTACCAGCTG GGTAACTTCA GGTGGAGCCC AGTTGACAGG AAATGTTTCT 000400 000401 CCAGAAGCTG AAAAGCTGCC TGGTAAAGGC CTTTCATAAA ATGGTCTGCG TTTGGGACCA GGAAGACAGA AGACTCCTCA 000480 000481 AGAAGAGAAC TGGAACCTTA ACCCACTTCA GACTTCTTCA TGTCTGAAGC TTATTTCCAC CATCCCATTG AGAACCAAAG 000560 000561 A |
Predicted Small Protein
Name | ENST00000524338.1_smProtein_392:526 |
Length | 45 |
Molecular weight | 5355.4691 |
Aromaticity | 0.0909090909091 |
Instability index | 54.8545454545 |
Isoelectric point | 10.3060913086 |
Runs | 8 |
Runs residual | 0.0187165775401 |
Runs probability | 0.0182498675146 |
Amino acid sequence | MFLQKLKSCLVKAFHKMVCVWDQEDRRLLKKRTGTLTHFRLLHV |
Secondary structure | LHHHHHHHHHHHHHHHHEEELLHHHHHHHHHHLLLLHHHHHHLL |
PRMN | - |
PiMo | - |