ENST00000525926.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000525926.1

Source

Gencode19

Same with

lnc-CTD-2210P24.4.1-3:3

Classification

intergenic

Length

564 nt

Genomic location

chr11+:45604075..45605024

Exon number

2

Exons

45604075..45604279,45604666..45605024

Genome context

Sequence
000001 TGGGCTGAAG GCAGCAGTAG GGCGATGGAA AGCCTGGCCA AGGGCTTCTA GAACTTGAAG CTCACCATTT TTGGATGACA 000080
000081 TTCTGTGAAC GAAGTGTTCT CTATGAGATA CTAAGAGCAA TATAGGGTAA TCACTGGTGA CAGAAACATC TGCTCATGCA 000160
000161 GGTTCATGTC AAAGTCCAGG GTTGAAGGAG AACCCCTCAT CCCAGGTGTG GCAGAATTGA TGCCCTATAA CTTCTGAGTG 000240
000241 TAGGTCATAA AAGGCAATGT GGCTCCCCCA GCTCTCTCCC TCTGTCAAGA TGCTTTTCCT TGGAATCCAG CTGCCATGTT 000320
000321 GTGAGAAAGC CCAGGGCACC GCAGAGACCA CATGTGGGTG TTCCAGCCAA CAGCCCCAGC TAGGTCCCCA TGGAGAGCCC 000400
000401 ACACCAACCA CCAGATATGA GGGTTCAGAC TCCAGCCCAC AGTCTTCAAG TCTTCCAGCT GCAGTCCCAG ACATCATGAA 000480
000481 ACCATTCTGC TGTGACCTGT CAGAATTTCT GACCCCAGAA ACTGTTGGAG ATAATAAATA ATTACTGTTG TTTTAATCCT 000560
000561 CTAA
[back to top]

Predicted Small Protein

Name ENST00000525926.1_smProtein_389:478
Length 30
Molecular weight 3305.6549
Aromaticity 0.0344827586207
Instability index 84.9206896552
Isoelectric point 5.94976806641
Runs 7
Runs residual 0.0418103448276
Runs probability 0.0423448658743
Amino acid sequence MESPHQPPDMRVQTPAHSLQVFQLQSQTS
Secondary structure LLLLLLLLLLLELLLHHHHHHHLHHHLLL
PRMN -
PiMo -