ENST00000531715.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000531715.1 |
Source |
Gencode19 |
Same with |
lnc-OR5B21-1:3,NONHSAT021470 |
Classification |
intergenic |
Length |
585 nt |
Genomic location |
chr11-:58265361..58270509 |
Exon number |
3 |
Exons |
58265361..58265477,58265646..58265863,58270260..58270509 |
Genome context |
|
Sequence |
000001 AGTCAAAACT CTACCAATTG CCAGTGGTGA AGCTGGTATA AGCCACGTAT CTCTGAGCCA ATTTTCTTAT CATCAAAGTG 000080
000081 AAGACAATAG CACCAGCCAT ACCTTCCTTA GGGCGTTTTG CAGGCTAAAT GAGATAGTGG GTGAGAAAGC ATCTTCAGAA 000160 000161 TTGCTACCCT CTTTTGAACT ATAGTGTTGC TGTTGGTAAT AACATAAGCA GAGCTGAATG GGGAGTTCCT AAGCAACCAT 000240 000241 CTGAACTCGG GTCCCTCGTT GGCTGCTCGT CAGATTTCTC TCTTCAATTC CAAGCGCATC TTATGTAAAC AATAGTGTCT 000320 000321 ATGATAGTGG ATGTGATTGT GTGCTACCTG GATCTCCTAG CTGAAATCCT TCGAAGAATT TCCTTCAGTC AATGGGAGCC 000400 000401 ACCTCCCCTG AGGTTATGGC TCCAGGTGAA GATTAAACAG CTGTAGAAGT GTCATCCAAG ATTGGCCAAT GCTGTTCCTG 000480 000481 AGAGTCCTTC CTGGAGAGCC ATCTGCACAC AGATCTCAGT CTCAGAGTCT ATTTCCCAAT GAATCTAATC TGAGAGATCT 000560 000561 CTTCATTTGC TGTTTTTTCC CTGTA |
Predicted Small Protein
Name | ENST00000531715.1_smProtein_320:445 |
Length | 42 |
Molecular weight | 4936.964 |
Aromaticity | 0.0975609756098 |
Instability index | 69.3195121951 |
Isoelectric point | 7.93475341797 |
Runs | 6 |
Runs residual | 0.0296274128385 |
Runs probability | 0.042410057116 |
Amino acid sequence | MIVDVIVCYLDLLAEILRRISFSQWEPPPLRLWLQVKIKQL |
Secondary structure | LEEEEEHHHHHHHHHHHHHHHHLLLLLLLLLLHHHHHHHHL |
PRMN | - |
PiMo | - |