ENST00000535567.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000535567.1 |
Source |
Gencode19 |
Same with |
lnc-ZNF705A-1:7,NONHSAT026298 |
Classification |
intergenic |
Length |
724 nt |
Genomic location |
chr12+:8346127..8356724 |
Exon number |
6 |
Exons |
8346127..8346251,8347016..8347077,8347325..8347392,8347873..8348008,8348853..8349114,8356654..8356724 |
Genome context |
|
Sequence |
000001 AAAGATGCAG CCGACTTGAT TGTGGTGGAT GAGCTTTTTG ATGTGCTGCT GGATTCTGTT TGCTAGTATT CTATTAAGAA 000080
000081 TTTTTGCATT GATGTTCATC AGGGATATTG GCCTGGATTG AGCAGCTTGA CTACCACACA AATTAATCCA CTCAAATGTT 000160 000161 GGCAAGTGGA GCAGAGTCCC AGGACAGGTA CAGAAACACC CCCAGTTCAA GGATCTTCAC ACCTGGATTT AGGCCTACAC 000240 000241 CTGCAACTAC CCCAGATGGA GCCATCTCAG CCATGACAAC AGAGAATGTA CCACTCTCAC GTGAGGAAGA GGGGTAGGCA 000320 000321 GTGCTCCTGT ATCACCAGCT GTTAATGAGA CCCTGAGGAA ACCACATCAT GGAGATCAGC CCTTCTCTCC TGCCAGTTAT 000400 000401 CCAGGCAGTG ACTTTCTGTA CAGCTACAGT CACCTCTGGA CACCTGCGGA GACTTTAAAA ATTTCCAGAA GGTCAGGAAT 000480 000481 TTTTGGAGAC CTTTCTTATG GCTACGTTGC CTGCAAAGGT GAATCAATAA GCTTCTGAAC TGACTTAGAA AATGTTGCAG 000560 000561 AGACTCTTGT GAACAGATAG ACCCTCTCCT GCCACTCCAG ATAGACGTAT CCGGGTCACA CACACCTGAT TTAACAACAT 000640 000641 CTCATTATCT CAGAGTCTCA CTCTGTCACC CAGGCTAGAG TGCAATGGCA TGATCTCGGC TCACTACCAC CTCCGCCTCC 000720 000721 AGGG |
Predicted Small Protein
Name | ENST00000535567.1_smProtein_155:316 |
Length | 54 |
Molecular weight | 5699.1742 |
Aromaticity | 0.0566037735849 |
Instability index | 51.6075471698 |
Isoelectric point | 4.76678466797 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0281878517173 |
Amino acid sequence | MLASGAESQDRYRNTPSSRIFTPGFRPTPATTPDGAISAMTTENVPLSREEEG |
Secondary structure | LLLLLLLLHHHLLLLLLLLEELLLLLLLLLLLLLLLEELLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |