ENST00000535567.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000535567.1

Source

Gencode19

Same with

lnc-ZNF705A-1:7,NONHSAT026298

Classification

intergenic

Length

724 nt

Genomic location

chr12+:8346127..8356724

Exon number

6

Exons

8346127..8346251,8347016..8347077,8347325..8347392,8347873..8348008,8348853..8349114,8356654..8356724

Genome context

Sequence
000001 AAAGATGCAG CCGACTTGAT TGTGGTGGAT GAGCTTTTTG ATGTGCTGCT GGATTCTGTT TGCTAGTATT CTATTAAGAA 000080
000081 TTTTTGCATT GATGTTCATC AGGGATATTG GCCTGGATTG AGCAGCTTGA CTACCACACA AATTAATCCA CTCAAATGTT 000160
000161 GGCAAGTGGA GCAGAGTCCC AGGACAGGTA CAGAAACACC CCCAGTTCAA GGATCTTCAC ACCTGGATTT AGGCCTACAC 000240
000241 CTGCAACTAC CCCAGATGGA GCCATCTCAG CCATGACAAC AGAGAATGTA CCACTCTCAC GTGAGGAAGA GGGGTAGGCA 000320
000321 GTGCTCCTGT ATCACCAGCT GTTAATGAGA CCCTGAGGAA ACCACATCAT GGAGATCAGC CCTTCTCTCC TGCCAGTTAT 000400
000401 CCAGGCAGTG ACTTTCTGTA CAGCTACAGT CACCTCTGGA CACCTGCGGA GACTTTAAAA ATTTCCAGAA GGTCAGGAAT 000480
000481 TTTTGGAGAC CTTTCTTATG GCTACGTTGC CTGCAAAGGT GAATCAATAA GCTTCTGAAC TGACTTAGAA AATGTTGCAG 000560
000561 AGACTCTTGT GAACAGATAG ACCCTCTCCT GCCACTCCAG ATAGACGTAT CCGGGTCACA CACACCTGAT TTAACAACAT 000640
000641 CTCATTATCT CAGAGTCTCA CTCTGTCACC CAGGCTAGAG TGCAATGGCA TGATCTCGGC TCACTACCAC CTCCGCCTCC 000720
000721 AGGG
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Predicted Small Protein

Name ENST00000535567.1_smProtein_155:316
Length 54
Molecular weight 5699.1742
Aromaticity 0.0566037735849
Instability index 51.6075471698
Isoelectric point 4.76678466797
Runs 7
Runs residual 0.0281868384722
Runs probability 0.0281878517173
Amino acid sequence MLASGAESQDRYRNTPSSRIFTPGFRPTPATTPDGAISAMTTENVPLSREEEG
Secondary structure LLLLLLLLHHHLLLLLLLLEELLLLLLLLLLLLLLLEELLLLLLLLLLLLLLL
PRMN -
PiMo -