ENST00000535689.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000535689.1 |
Source |
Gencode19 |
Same with |
lnc-WDR74-1:14,NONHSAT021846 |
Classification |
intergenic |
Length |
550 nt |
Genomic location |
chr11-:62620826..62622960 |
Exon number |
7 |
Exons |
62620826..62621062,62621273..62621305,62621490..62621536,62621991..62622023,62622360..62622410,62622605..62622688,62622896..62622960 |
Genome context |
|
Sequence |
000001 CTTATTGGGC TCCTGTCTGC AGGATTTACG CGCACGTTGG AACCGAAGAG AGCTCTGTTG TTGCAATGTT CAGCCCACAA 000080
000081 GAGCTTACTG GTGAAGGAAT GGGACAAGAC CCATCTTTAT GCAAAGCCAG CGTTACAGTA ATGTTCCAGC ATCTCATAAT 000160 000161 CTATCCTGGG GAATTCAGCT GCCTCCCAGG GTGAATACAG GTATTCCTGA TGACAGTCTG CCTCTATCTT ACAGAGCAGC 000240 000241 TTGTTGCTAT ATACCATTGA AAAGCCTTCA GAGCTGAGAG GTACTACTAA CCAATAACCT GCTTGGCTCA AAGGGCCAGC 000320 000321 ACCTTCTCTC TAAAGCCCAA GAGGAGTTTG AGGTAAATGG CTTTGCAATA GTTACCATCA ATGGCTGCTA TATAAAATTT 000400 000401 TCTGTGATTT TTGTGTGTGA TAGCACTGTG GTCTGGGTGA ATGTACACAG ACATAACTGG CTTAACCCAA AGTCTTTGAT 000480 000481 CTCCTGAACC ACCAGTGATG AATTGCTGCT CACCAGTGAT GAGTTGAATA CCGCCCCAGT CTGATCAATG |
Predicted Small Protein
Name | ENST00000535689.1_smProtein_65:193 |
Length | 43 |
Molecular weight | 4547.2321 |
Aromaticity | 0.0952380952381 |
Instability index | 50.8047619048 |
Isoelectric point | 4.39630126953 |
Runs | 8 |
Runs residual | 0.0143158529234 |
Runs probability | 0.0124977919095 |
Amino acid sequence | MFSPQELTGEGMGQDPSLCKASVTVMFQHLIIYPGEFSCLPG |
Secondary structure | LLLLLLLLLLLLLLLLHHHHLLLLHHHHEEEELLLEEELLLL |
PRMN | - |
PiMo | - |