ENST00000537961.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000537961.1

Source

Gencode19

Same with

lnc-SLC6A12-1:1,NONHSAT025306

Classification

antisense

Length

1038 nt

Genomic location

chr12-:276168..291565

Exon number

2

Exons

276168..276873,291234..291565

Genome context

Sequence
000001 TTCTGGCAGA ACCACTTCTG GACCTGTCCC TCTGCACCCC CCATTCCTGC GCCCTCATTT AACCTCCCTG ACTCTGACCT 000080
000081 GGGCTTGGTC TATCTTGGGG CCTGGCTGCC GTCCTGGGAC GGGAAGGGGA GCAGATCAGA ACTCAGCCTG CGGCTCCAGG 000160
000161 CCGCTGGGCG CTGGCTGGGC CTCACGTTCT CCTGGAAGGA CCACCTCCCT TGCCCTCCAC GGGGTCTGCC TTTGCTCCCA 000240
000241 AGGCTCCGCC CTGGACGGAG CGTCCTTCTT GCCTGGGCGT CTTCAGACCT TCATCTGTGA CACCGGGGGC CATGTGGCTC 000320
000321 ACCCCGAGGA AGAGACGAGG ACTCGCTGTG TTGGCTGTTC TTGAGCTTCT GGGCTCAAGC AATCCTCCCT CCTGAGCTTC 000400
000401 CCAGAGTGCT AGGATTACAG GTGTGAGCCA CTGAGCCCAG CCCATTTTCT TTTTTTTTTT TTTCCTGGCT TCCTTTCCTC 000480
000481 CCTGTCTCCC TGGCCTACCC TTCCTCTTCC CTCAGCTGTT CCTTCCCTTT CTCTCCAGTG AAGACTAAGG GCCAAGCATG 000560
000561 AGCCTTTCTT CCTGCTCTTT TACCCTTGAG GCAGCAGGAG AGGATATTCA CCTCCTGACA TGACAGATTC TGACGCTATC 000640
000641 TGCTCCTCTG TGACTTTGGG AAGCGGGGTA TGTGCTGCTC CTGGGCTGAT GGGGGAAAGT GCCTCTCCCA GCAATGCTGG 000720
000721 TGCCACTTGG TGTGCTACGG CCCCCCAGGG CAGTGCGGAG CCATCTGGGA CAGTTAGACA ATGAGAGACG TGAAGCCATT 000800
000801 TCAAGGTGCT TCCTTGAAAA TGCTCCAGAA AAACAGCAGA GGCGGCCTCT CTGGGGATCC GGTCCAGCCC TTGAAAAGAA 000880
000881 TCTGTTTGTT TCACCACTGA ACTCAAATAA GCCAACAGAT TGAAGGAAGG GAGTTTCCAC GCGCCCCTCC CCACCAAGCA 000960
000961 GTTACCTGAG TTCCAGAGTC CAGTCCGATG GATCCCATTT TACCCTGGTT TAAATTGTTT CCTTAGAAAA AAATAAAC
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Predicted Small Protein

Name ENST00000537961.1_smProtein_713:922
Length 70
Molecular weight 7801.8853
Aromaticity 0.0434782608696
Instability index 73.4362318841
Isoelectric point 10.2470092773
Runs 11
Runs residual 0.0200889654183
Runs probability 0.0420581008816
Amino acid sequence MLVPLGVLRPPRAVRSHLGQLDNERREAISRCFLENAPEKQQRRPLWGSGPALEKNLFVS
PLNSNKPTD
Secondary structure LLLLLLLLLLHHHHHHHHLLLLHHHHHHHHHHHHHLLLHHHLLLLLLLLLHHHHLLLEEL
LLLLLLLLL
PRMN -
PiMo -