ENST00000540024.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000540024.1

Source

Gencode19

Same with

lnc-TBC1D30-2:3,NONHSAT029173

Classification

intergenic

Length

557 nt

Genomic location

chr12+:65277554..65368391

Exon number

5

Exons

65277554..65277645,65278974..65279080,65341096..65341242,65347433..65347602,65368351..65368391

Genome context

Sequence
000001 ATAAAATCTG GGAGCCCAAG CAGCATATTT GTGGGATTTG TCTGACAGAA CGCAATGGAA ACAGAGCGTG GCATTCGCTC 000080
000081 CATCTCCCCC AGATGTTCCA TAAGTTTCTG CTTCCATCAG CAATGTAAGG AAGTGCCCAA TTCCTCCTAC CCCCACATTA 000160
000161 CTGAGAATCT TATCAAATTT TTTGATCTTT TCTGATTGGG CAAGGAAAGC ATCTTTTGGG ACCATCAAAT GCATCCTGTT 000240
000241 CCTGAAGGAG CAGAAACAGT GAAAGCGGAC ACTTGTCTCA GCTGGCCTCT GTCTCTAGCA TGAAATCCCT GGAGAGTGAT 000320
000321 TTTGCAGCCC CTCTTCCAGA ACACAGGAAA AGTCTGGGTG TGGCAAAAGG TGTCCTGAGG AGTGATGGGA TGTTAGGGCA 000400
000401 TGAAGAAGAA TGAAGAAGAG TGTCCAAGAC AACTGGTTCA TGTTGCAATT TTACTGAAGG TCAGCAAAGT GGAGAATGCT 000480
000481 GTTCTGGGAG AACTGGATGC CTTCAGATTG TGCCAGCTCT CCAATCCTGA AGTCAAAATG GAATGCATCT CTGCTCT
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Predicted Small Protein

Name ENST00000540024.1_smProtein_299:412
Length 38
Molecular weight 4022.5213
Aromaticity 0.027027027027
Instability index 58.3756756757
Isoelectric point 5.54534912109
Runs 7
Runs residual 0.009422266303
Runs probability 0.0433542786485
Amino acid sequence MKSLESDFAAPLPEHRKSLGVAKGVLRSDGMLGHEEE
Secondary structure LLLHHHLLLLLLHHHHHHLLLLLEEEELLLLLLLLLL
PRMN -
PiMo -