ENST00000540136.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000540136.1

Source

Gencode19

Same with

lnc-SLC6A12-2:1,NONHSAT025303

Classification

antisense

Length

1101 nt

Genomic location

chr12-:273830..275487

Exon number

2

Exons

273830..273920,274478..275487

Genome context

Sequence
000001 TAAAAGAGAG TGAAGAAATG AGGCCAACCA GATGCAGTGT ACAGACTTGG GCCACAGTGG GGGAGGTGAC AGCAGACGGT 000080
000081 TTGGTGGGAA GGAACGCACC AGAGCCCCAT GGGCCTGCCT GGCCAGCTCG CTTGGTCATC CTGGTAAAAC AGCAGAGCTC 000160
000161 TCTGTTCCAA GAGGCCCACG CGCAGCCCCA CATGCCTGCT GATCTGTGTA CACACGTGTG TGCACTCTAG CAAGCCTCAC 000240
000241 TTTAATTGTG AAGAAACATG GGAACCGGTG CTCCCACCCG GGCTGTGGGA GTGTGGTGCG GTGGGGCCTG GACACGGGGA 000320
000321 GGGTCCGAAG TGGGGCCAGC TCCCTGGAGT CAGGCATGTC TGTCTCAAGC TGCCCCTGTC CCTTGCTGAA TGGGAACCCC 000400
000401 CACCAGCTGC CTCGGGAGCC CGTGTCCTTA CACTCTATTC GGATCTGCTC CAGCTCCGTC ACCTCAGCAA TGGACTCCTT 000480
000481 CAGGTCCTCC ACGAACTTCT GCATCTCGTC CGAGCCCAGG GCACAGAAAT GCAGCACCTG CTTCTTCTCG GAGCCCGAGA 000560
000561 GCGGGGTCAC CAGTGTGATG CCATGAGAGT AATCTGGAAA GCAGACCCCA GGCCCCCAGT GGGCTGTGAG CAGCAGCAGC 000640
000641 CGAGGGCCAG AGCCAGCCAG ACATGAGGAG GGCACGGGGT CTCATGCCTC CACCCACTCT GCTGTCCAGC CCTTCTCCCT 000720
000721 CAACTCGCCC CAGCCATTTC ATCCATTCAT TCCTTCTCAA AGACTTACAC TGGCTGTCAA AGACTTACAC TCGTTCTCAA 000800
000801 AGAGCTGGAA CTGCATGCCC AGCAGGCCAA CTGACTTGCA AAAGGTGTAC GTGGAGGAGC TCTTCTTCTT CGGGCAAAGT 000880
000881 TTGAGAATCT GTTCAGGAGA GGGAAACAGG CATGCCCTGA TGAACAGACA CTCACGGACA CATGGATGCA CAAACACCCG 000960
000961 GGGGATGCAC GATCACACAA ACCCACGCAG TGATGAATGT GCACATACAG CTTCTGTGAG CTGAGCCCTG GAGATACAGG 001040
001041 AGAACTCAGG ACAGAGCCCC TGCCCTTAAG GTGCTTATGG AATGTGGAGT GTCACAGTGT C
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Predicted Small Protein

Name ENST00000540136.1_smProtein_662:883
Length 74
Molecular weight 8114.3199
Aromaticity 0.0684931506849
Instability index 91.1890410959
Isoelectric point 11.5629272461
Runs 7
Runs residual 0.0482545293858
Runs probability 0.0362883892295
Amino acid sequence MRRARGLMPPPTLLSSPSPSTRPSHFIHSFLLKDLHWLSKTYTRSQRAGTACPAGQLTCK
RCTWRSSSSSGKV
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLEEL
EEEEEEELLLLLL
PRMN -
PiMo -