ENST00000542265.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000542265.1 |
Source |
Gencode19 |
Same with |
lnc-SIRT4-1:1 |
Classification |
antisense |
Length |
854 nt |
Genomic location |
chr12+:120639094..120650722 |
Exon number |
4 |
Exons |
120639094..120639229,120644348..120644424,120647642..120647737,120650178..120650722 |
Genome context |
|
Sequence |
000001 GCGAAGGAAG GCGCTGCCTC GCGTTGGAGG AGCTTGCTCT GAGCTGCTGC CACCTGCTGG GCTGGAGCTG GAGCTGGAGC 000080
000081 TGCGAATTCG GAGTCCCGGT TCCCTGTGCC ACCTGGCGAG CTCAGCAAAC TAAAAGTCTC TTTGTCTTCA TCGTTTCCGG 000160 000161 CACTGATGTG AGCACATCAT AAGCACAAGA CCTGGACACC TTTACAATCA GAGGGCCTAG GACTGGAGCT CTGGATCTGA 000240 000241 CCGGAGCAAA GAGGAAGCAC GCAAATCCGG ACATGACGAC GAGGAGGCAG TAGAGACCCA TCCTCAACTG TGCCCTTGTT 000320 000321 GAGCTGCTTG AGGCAGAAGG CACAGACGAA GTGCTCGGGG TGGAACTTCT TGGCCATGGC GGTGATGCAG CGGCCGGTGA 000400 000401 TGGGCTTCTG GCAGCCAGAA CACAGCGAGC CGCGCCGCTC GTGGTAGTGC ACCTCACAGT AGGGCTGCCC GTCGTGCTCG 000480 000481 AAGAAGCTGC CGTTCACGAA TGGCGTGAAG CATTCCTGCC AGGCGGAGAG AGGGGCTCAG GGAGCTGCCC CTCGGGCTAG 000560 000561 AGCTGCACCC TGTGTGATGG GGCCGAGGTG GGCATAGTCG GCACGCTCGG AGTGACTCCT ACTTGCTAGG CGTTTCCCAT 000640 000641 GTGCCGTGTT GTCCTAAACG CTCATTTTTC ATTTTTATTT TATTAAATAA ATTTTTTTTG TAGAGATGGG GGTCTCACTA 000720 000721 TATTGCCCAT GCTGGTCAAA TGTGGCCTCC TGCAATCCTC CCACCTCGGC CTCCCACAGG GCTGGGATTA TTTAGTTCTC 000800 000801 CCAACAGGGG AGGCAACTGA AGCACACAGG TGAAGTAACT TGCCCAGGGT CATG |
Predicted Small Protein
Name | ENST00000542265.1_smProtein_728:832 |
Length | 35 |
Molecular weight | 3721.2667 |
Aromaticity | 0.0588235294118 |
Instability index | 56.1117647059 |
Isoelectric point | 5.96954345703 |
Runs | 7 |
Runs residual | 0.0197319434103 |
Runs probability | 0.0310772957832 |
Amino acid sequence | MLVKCGLLQSSHLGLPQGWDYLVLPTGEATEAHR |
Secondary structure | LEEEELHHHLLLLLLLLLLLEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |