ENST00000545526.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000545526.1 |
Source |
Gencode19 |
Same with |
lnc-NRIP2-6:1,NONHSAT025464 |
Classification |
antisense |
Length |
609 nt |
Genomic location |
chr12-:2777666..2781386 |
Exon number |
2 |
Exons |
2777666..2778182,2781295..2781386 |
Genome context |
|
Sequence |
000001 GACTTGGGAT GAGAGCTCTT CCTTCTACGT TCCAAGAGAG AAGCTTCTTT GGCTTGGTAC TGGACTTGGG ATGACAGCTC 000080
000081 TGCTTCTCTG AGGGCCGTCC TGACCAGGGC AAACAGGGTG GCATTGAACA TGACTGTCCC GTCGCTGTTC AGAGGCATGT 000160 000161 TCATGGAGAC CAGGCGCTGC AGGCGAAGAG AAGCAAAGCT GGTGATGATG GCAGGCGGTG CTTAGGGGAC CGCAGAACAC 000240 000241 CGTGGCAGAG TGATATGGTT TGGCTCTGTG TCCTCGCCCA AATCTCATGT TGAATTGTAA TCCCCAGAAT TGGAGGTGGG 000320 000321 GCCTGATGGA AGGTGATTGC ATCATGGGGT GGATTTCTCA TAAATGGTTT GGTACCATCC CCTTGGTGAG TGAGTACTCA 000400 000401 TGAGATCTGC TTGTTTAAGT AAGTGTGTGG TCCCTCCCCC TTCTCTCTTG CTCCCTGTCT GTCCATGTGA CGTACCTGCC 000480 000481 TCCCCTTTGC CTTCCACCAT GATTGATTGG AAGCTTCCTG AGGCCTCCCC AGAAGCAGAA TGCTAGTGCC ATGCTTCCTG 000560 000561 TACAGCCTGC TGAACTGTGG GCCAATTAAA CCTGTTTTCT TATAAATTA |
Predicted Small Protein
Name | ENST00000545526.1_smProtein_8:73 |
Length | 22 |
Molecular weight | 2384.7503 |
Aromaticity | 0.142857142857 |
Instability index | 60.2476190476 |
Isoelectric point | 5.82354736328 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0155272919979 |
Amino acid sequence | MRALPSTFQERSFFGLVLDLG |
Secondary structure | LLLLLLLLLLHHHHLEEELLL |
PRMN | - |
PiMo | - |