ENST00000545706.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000545706.1 |
Source |
Gencode19 |
Same with |
lnc-M6PR-1:1,NONHSAT026379 |
Classification |
antisense |
Length |
496 nt |
Genomic location |
chr12-:9139771..9149162 |
Exon number |
3 |
Exons |
9139771..9140077,9140908..9141026,9149093..9149162 |
Genome context |
|
Sequence |
000001 GTAGCTATAA AATTTAGGAA CTATATGTTC TCCCCCACTG CTTTAGAGTA ACCTCTGGAT TTTTCCCAAG CCATGACAGA 000080
000081 ATGGCATTAG ACTTACTCTC CAATCAAAAT ACAACACATG GCAAGACACA CAAGGCAGCT ATTTTCAGGA ACACACAGGC 000160 000161 AGCATTGTGA TCCTTGAGAG AATACAAAGA CTGAAAGTCT AAGATCAAGA TGCCAGCAGA GTTGGTGTTT GGAGAGTGCT 000240 000241 TCCCCTGTGG GTTGCAGACT TCTCACTATA TCCTCAAGTG GCTTTTCCTC AGTGTGTGCA CAAGGGAAGA AAGAGAGAGG 000320 000321 GCTCTGGTCT CTCTTCTTAC AAGAACATTA ATCCTATCAG ATCAGGGCCC CACCCTTGTA ACCTGATTTA ACCTTAATTA 000400 000401 CTTCCTTAAA CACTCCATCT CCAAATACAG TCACACTGAG GATTAGGGCT TCAATATGTG AATCTGGGGG AGACAAACAT 000480 000481 TCAGTCCATA ATAATA |
Predicted Small Protein
Name | ENST00000545706.1_smProtein_209:385 |
Length | 59 |
Molecular weight | 6583.6754 |
Aromaticity | 0.0862068965517 |
Instability index | 59.3 |
Isoelectric point | 5.62457275391 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0455589279119 |
Amino acid sequence | MPAELVFGECFPCGLQTSHYILKWLFLSVCTREERERALVSLLTRTLILSDQGPTLVT |
Secondary structure | LLEEEEELLLLLLLLLHHHHHHHHHHHHHLLHHHHHHHHHHHHHHLEEELLLLLEELL |
PRMN | - |
PiMo | - |