ENST00000547387.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000547387.1

Source

Gencode19

Same with

lnc-TUBA1C-1:3

Classification

antisense

Length

897 nt

Genomic location

chr12+:49521794..49525145

Exon number

2

Exons

49521794..49522647,49525103..49525145

Genome context

Sequence
000001 CCTCCTCATA ATCCTTCTCA AGGGCAGCCA TATCTTCACG GGCCTCTGAA AACTCGCCTT CCTCCATCCC CTCACCCACG 000080
000081 TACCAGTGAA CAAAGGCACG CTTGGCATAC ATCAGGTCAA ACTTGTGGTC CAGGCGAGCC CAGGCCTCAG CAATGGCTGT 000160
000161 GGTGTTGCTC AGCATGCACA CAGCTCTCTG TACCTTGGCC AGGTCTCCAC CAGGCACCAC AGTGGGAGGC TGGTAGTTGA 000240
000241 TGCCAACCTT GAAGCCAGTG GGGCACCAAT CCACAAACTG GATGCTGCGC TTGGTTTTGA TGGTGGCAAT GGCAGCATTG 000320
000321 ACATCTTTGG GAACCACGTC ACCACGGTAC AACAGGCAGC AAGCCATGTA TTTACCATGG CGAGGGTCAC ATTTCACCAT 000400
000401 CTGGTTGGCT GGCTCAAAGC AAGCATTGGT GATCTCTGCT ACAGAAAGCT GTTCATGGTA GGCTTTCTCA GCAGAGATGA 000480
000481 CAGGGGCATA TGTGGCCAGA GGGAAGTGGA TGCGGGGGTA GGGCACCAGG TTGGTCTGGA ATTCTGTCAG GTCAACATTC 000560
000561 AGGGCTCCAT CAAATCTCAG GGAAGCAGTG ATGGAGGACA CAATCTGGCT AATAAGGCGG TTAAGGTTAG TGTAGGTTGG 000640
000641 GCGCTCGATA TCGAGGTTTC TACGACAGAT GTCATAGATG GCCTCATTGT CTACCATGAA GGCACAATCA GAGTGCTCCA 000720
000721 GGGTGGTGTG GGTGGTGAGG ATGGAGTTGT AGGGCTCAAC TACAGCTGTG GAAACCTGGG GTGCTGGGTA AATGGAGAAC 000800
000801 TCCAGCTTGG ACTTCTTGCC ATAATCAACT GAGAGACGTT CCATGAGCAG GGAGGCGAAG GCGACAGGAG CAGACACCGG 000880
000881 GTCCCGGTTA CCGTCCC
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Predicted Small Protein

Name ENST00000547387.1_smProtein_239:460
Length 74
Molecular weight 8180.5146
Aromaticity 0.0958904109589
Instability index 50.9164383562
Isoelectric point 10.4370727539
Runs 12
Runs residual 0.0202386212992
Runs probability 0.047569628452
Amino acid sequence MPTLKPVGHQSTNWMLRLVLMVAMAALTSLGTTSPRYNRQQAMYLPWRGSHFTIWLAGSK
QALVISATESCSW
Secondary structure LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHEEELLLLLEEEEEELLLL
EEEEEEELEELLL
PRMN -
PiMo -