ENST00000547866.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000547866.1

Source

Gencode19

Same with

lnc-WNT1-2:2,NONHSAT028058

Classification

antisense

Length

2114 nt

Genomic location

chr12+:49392155..49412980

Exon number

2

Exons

49392155..49392473,49411186..49412980

Genome context

Sequence
000001 CAGGCGCTCC GGCCGCAAGG GAGCAGGGAG CCCTGCCAGC TGGGCCACCC GAGGGGCGTT GCGGGGCTCC GGGCGGGGTC 000080
000081 GACCCGGGGG GCTCCGTCGG GCCCCACCAG CCTTGCGCCT TTTTCGCTCG GTCTCCTTGG CCTCCCGCTC CTGCGACGCC 000160
000161 GCTTTCCTTT TCTCTTGCTC CCGAGCTCGG ACCTCGGCCA GGGGCCCCGC CCGCCAGTTG GTCGCCTCCT GCAGCACCCT 000240
000241 GGAGGCCCAG GGCCGGCGGG GCGGCGGCTG TGGGGATCCC GGGCGCGGCC CACACCTGGG ACAATGAGCA GGAACCCAGG 000320
000321 CTTTCATCAT GTTGCCCAGG CTGATGCTGA ACTCCTGAGC TCAAGCAATC CACTTGCCTT GGCCTCCCAA AGTACTGGCA 000400
000401 TTACAGGCGT GAGCCACCAC ACCTGGCTGA GTTTTCTTTT TCCTCTTTTT AACTTCTACC CCAGAGCCTA ATCCAGTACA 000480
000481 TAAAGTGTAA AGGCTAAATT AGAAAATCTA TATAAAAATG CTTTGTAAAC CATAATACAT TTACAAGTAA GTAGAATATG 000560
000561 ACATGTCATT TTAAATTTAA TGGAATTAGA CTCCTTATTT TTGTTTAAGA TTATCCTGAT TAGTCAGAAT TGGCTCCCTT 000640
000641 GCCTGGGAGA CCAACTGCGA ATCATTTTAG TACTTTGGTC GGTTTTCTTT TTGAAAACCT GAAAGAAACA ACCTCTCTGT 000720
000721 GAGCAGAGAA ACGGTGTGGC AAAGAATTAC TCTGGGCATG TAATCCAAAG CAAAGTGAAC CTGCAGTCCT TTCGTAACTA 000800
000801 CAGTAGCAGA TGATAAAAAC CAAGATGGAA AGAGTTACTC TGCCTGAAAG AAGACACATG GTTAAAAACT GTGGAGAGGG 000880
000881 AAGTGTATGG GAGGGGTTAC AGAGCGCTAG AAAAAGACTC CTGAGAGTGA GGGTGGGTGC AAACATGTAG CAGGCAACCC 000960
000961 GCAGCATCTG TGGGAGGGTG ACAGGGCCCT GCCACAATTG GTCAATGCCT GCTCGCCAAG AATGAGCTAT GCCAAAACCC 001040
001041 CTGCTTAGAG TCGCAGAGCG GGCCATGACC TAAAATTGTC CAGGGACACA TCGGCCTCTA ACACTGCAAG ATTTCCTCTT 001120
001121 TCAAGCAAAC CTCAATTCTC GGTCTTATTA AGGGAATGTG ACTTCACTGG ACGCAGTATA AAGATCTTCA GATGTCCTCC 001200
001201 TGCCGGGGAT TGCAGGGATC ACAGAAAGAC CATCGAGGTC CAGGAGCTAC CTGCAAGCGG AGATCCCTCT GGACGCCCCG 001280
001281 TGCCTCACCC AGCAAAGCCG GCTCACAACC CTGCGCTCTC AAACCTCTAA AAGGGCTTGA GGTGCCAATA GGAAAGGAGG 001360
001361 CCCGAGATTG CCACGGCATA CGTGGGCCCC AAGGAGGGAG CCAGGAGTCA CTGCCTGCTT GGGCTAAGGG TACCGCGTAC 001440
001441 GGAAAGGCGG CGGGGACGCG GCCCAGTTCC AGGAGATGCG CCCAACGAAG AAGCGGAGGA ACAGGGTCAC GGGATAGGGC 001520
001521 AGACACCCGG CTGCTTTTTG TTTGCTAGAC ACCAGCGCCA GCCCCTGCCC GGCCCTCCCG GTCTCCTAAG GGTTGGGGGG 001600
001601 GTGTCTTAGG CTCCACAGCG CCCCCGACCG CCCTCCTGCA CTCCTCACCG TCTCCATTGC AAGAGGCGCC CGGCTTGGTT 001680
001681 TCCTCGCTTT AGGAAACTCT CTTGGGGCAG GCCCCGCCCC ACATCCGGTG CGGCGACGCC ACTTCCGCCC ACGTCATGGC 001760
001761 AGTCGCCAGA CTGGGGCGGA AGGCAAGGAA CCCACCCTTC CGGCGGTGGC GGGCCTCGGT AACCGCCCTC CCCCGGGTCC 001840
001841 TCGCGGACCG CACGGATCCG GCTGACGGCG AGGGTCATGG GACGGAGCCG CTTGTATTTA AAATGTTCTT TTTTTATTTG 001920
001921 TCGTTTAAAA ACAAACTTGG AAGAAGCAAA ATCCAAAACT TGCCCTTTGC CTCTCGCAAC ATAAATATGT ACAGTTCAGA 002000
002001 ATGATCGCTG ATACAAAACA TGCCAAGGAC AGGGGCGCTG AGGGTGGAGG GAGAGAGGGC GCTTTAAAAA AGGGAACCAT 002080
002081 TTCATCCGTT GTTACGAAGG ACCAACCTTG CTGT
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Predicted Small Protein

Name ENST00000547866.1_smProtein_809:949
Length 47
Molecular weight 5353.3525
Aromaticity 0.0217391304348
Instability index 59.1130434783
Isoelectric point 11.3118286133
Runs 8
Runs residual 0.0125517598344
Runs probability 0.0349430312666
Amino acid sequence MIKTKMERVTLPERRHMVKNCGEGSVWEGLQSARKRLLRVRVGANM
Secondary structure LLLLLEEELLLHHHHHHHHLLLLLLHHHHHHHHHHHHHHEEELLLL
PRMN -
PiMo -