ENST00000549360.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000549360.1 |
Source |
Gencode19 |
Same with |
lnc-PRKD1-1:4,NONHSAT036216 |
Classification |
intergenic |
Length |
768 nt |
Genomic location |
chr14-:30441875..30766223 |
Exon number |
3 |
Exons |
30441875..30442439,30449355..30449473,30766140..30766223 |
Genome context |
|
Sequence |
000001 ATGATAAGAT GTGCTTGCTT CCCCTTCACT TTCCGACTTG ATCGTAAGTT TCCCAGCCAG GCTTCCTGTA CAGCTTGTGG 000080
000081 AACTACTAAC CAATATAATT AGCCAATTAA CAAAAAGAAA AGAAAAGAAA AGAAAAGAAA AAGAAGCCAC GTGTTTTTAT 000160 000161 TTGGAGATGA GAGCATCCAG TTTCACATCA CTACTGAACA CATGTTTGCT GCAGTTTACT AGAGGTCCAC TTCAGACCCT 000240 000241 CTTTGCCTGG GTATCACCAG TGGAGGCTGC AGAACAGCCA AGATTGCTGC CTGCTTCTTC CTCTGGAAGC TTCGTCCCAG 000320 000321 AGGGACACCA GGCTGATGCC AGCTGGAGCT CTCCTGTATG AGGTGTCTGT CAGTCCCTGC TGGGAGGTCT CTCCCAGTCA 000400 000401 GGAGGCTTGG GGGATCAGGG ACCCACTTGA GGAGGCAGTC TGTCCCTTAG CAGAGCTTGA GCACTATGCT GGGAGAATAC 000480 000481 TCCTTGTCAG GATCAGCTGC TCTCTTCAGA GCCAGCAGGC AGGAAAGTTT AAGTCTGCTG AAGCTGTCCC CACAGCCGCC 000560 000561 CCTTCCCCCA GGTGCTCTGT CCCAGGGAGA TGGGAGTTTT ATCTATAAGC CCCTGACTGG CATTTCTTTC AGAGATGCCC 000640 000641 TGCTGAGTGA CGAGGAATCC AGAGAGGCAG TCCGGCCACA GCCACTTTGC CACGCTGTGT TGAGTTCTGC CCAGTCCAAA 000720 000721 CTTCCAGGCC CCCTTAGCAC TATCAGGGGA AAACCACCTA CTCAAGCC |
Predicted Small Protein
Name | ENST00000549360.1_smProtein_335:607 |
Length | 91 |
Molecular weight | 9833.1577 |
Aromaticity | 0.0888888888889 |
Instability index | 81.9745555556 |
Isoelectric point | 5.00213623047 |
Runs | 17 |
Runs residual | 0.0490299823633 |
Runs probability | 0.041974500452 |
Amino acid sequence | MPAGALLYEVSVSPCWEVSPSQEAWGIRDPLEEAVCPLAELEHYAGRILLVRISCSLQSQ QAGKFKSAEAVPTAAPSPRCSVPGRWEFYL |
Secondary structure | LLLLEEEEEEELLLLEEELLLHHHHLLLLHHHHHLLLHHHHHHHLLLEEEEEEEELLLHH HLLLLLLLLLLLLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |