ENST00000551847.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000551847.1 |
Source |
Gencode19 |
Same with |
lnc-LALBA-1:1,NONHSAT028004 |
Classification |
antisense |
Length |
588 nt |
Genomic location |
chr12-:48877070..48894744 |
Exon number |
3 |
Exons |
48877070..48877303,48880251..48880464,48894605..48894744 |
Genome context |
|
Sequence |
000001 CCCGGCTGCC ATCACATCTA GGAAGTGAGG AGCGTCTCTG CCCGGCCGCC CATTGTCTGA GATGTGGGGC GCGCCTCTGC 000080
000081 CCCGCCACCC TGTCTGGGAT GTGAGGAGCG CCTCTGCCCG GCCGCGACCC TGTCTCGGAG AAATAAGGAA CAAATGTTGG 000160 000161 AAACAATATC CCAACTCTCC CAGAATCTGA AGTGACACAT TATGAAACTG GTGGAAGACA AGATGTTTCT TGGAATTGAG 000240 000241 CTGGACACCC AAAATCACCC CATTTCTCAG GCAGCCAAAA GTCTCCTGCA GCCCTGGTGA ATCATTTCAT CCCATATATC 000320 000321 CTGCTTCGCT CTGGATCTAG CTGGTGCATG ACAGGAGATG GAGAAGAGGG AGGACACATG AAAGTCCCCA TCTTATTCAG 000400 000401 CCAGGAAGCA AGTGAAGCCA AATGAAGAGC CATAGAAGAC AGGAGGCCCT GGTTCTTCTC CCATAGAGTA TAGCAATCTA 000480 000481 AGGATGTTTG AGGGTCATCA TTAGCCCCAT TACCTTCTCT GCTGCTTGGA GGTCATTTCT ACCTTTTGTT CCTGATCCTG 000560 000561 GCAGGGATGC TGTGCCATTT GTTCTCAG |
Predicted Small Protein
Name | ENST00000551847.1_smProtein_347:424 |
Length | 26 |
Molecular weight | 2648.9185 |
Aromaticity | 0.04 |
Instability index | 55.136 |
Isoelectric point | 4.57110595703 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0389683801449 |
Amino acid sequence | MTGDGEEGGHMKVPILFSQEASEAK |
Secondary structure | LLLLLLLLLLLEEEEEELHHHLLLL |
PRMN | - |
PiMo | - |