ENST00000551847.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000551847.1

Source

Gencode19

Same with

lnc-LALBA-1:1,NONHSAT028004

Classification

antisense

Length

588 nt

Genomic location

chr12-:48877070..48894744

Exon number

3

Exons

48877070..48877303,48880251..48880464,48894605..48894744

Genome context

Sequence
000001 CCCGGCTGCC ATCACATCTA GGAAGTGAGG AGCGTCTCTG CCCGGCCGCC CATTGTCTGA GATGTGGGGC GCGCCTCTGC 000080
000081 CCCGCCACCC TGTCTGGGAT GTGAGGAGCG CCTCTGCCCG GCCGCGACCC TGTCTCGGAG AAATAAGGAA CAAATGTTGG 000160
000161 AAACAATATC CCAACTCTCC CAGAATCTGA AGTGACACAT TATGAAACTG GTGGAAGACA AGATGTTTCT TGGAATTGAG 000240
000241 CTGGACACCC AAAATCACCC CATTTCTCAG GCAGCCAAAA GTCTCCTGCA GCCCTGGTGA ATCATTTCAT CCCATATATC 000320
000321 CTGCTTCGCT CTGGATCTAG CTGGTGCATG ACAGGAGATG GAGAAGAGGG AGGACACATG AAAGTCCCCA TCTTATTCAG 000400
000401 CCAGGAAGCA AGTGAAGCCA AATGAAGAGC CATAGAAGAC AGGAGGCCCT GGTTCTTCTC CCATAGAGTA TAGCAATCTA 000480
000481 AGGATGTTTG AGGGTCATCA TTAGCCCCAT TACCTTCTCT GCTGCTTGGA GGTCATTTCT ACCTTTTGTT CCTGATCCTG 000560
000561 GCAGGGATGC TGTGCCATTT GTTCTCAG
[back to top]

Predicted Small Protein

Name ENST00000551847.1_smProtein_347:424
Length 26
Molecular weight 2648.9185
Aromaticity 0.04
Instability index 55.136
Isoelectric point 4.57110595703
Runs 5
Runs residual 0.00830188679245
Runs probability 0.0389683801449
Amino acid sequence MTGDGEEGGHMKVPILFSQEASEAK
Secondary structure LLLLLLLLLLLEEEEEELHHHLLLL
PRMN -
PiMo -