ENST00000553760.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000553760.1

Source

Gencode19

Same with

lnc-TSHR-5:3,NONHSAT038086

Classification

intergenic

Length

773 nt

Genomic location

chr14+:83108971..83124110

Exon number

3

Exons

83108971..83109018,83117268..83117340,83123459..83124110

Genome context

Sequence
000001 TGTGTGATGG GGCCGGAGCC AGTAAACAGG CTTCCTTCTC GCTCTGCTGT ATAAGAAGAA GAAGTAGGAG AAACAAAATA 000080
000081 AGGAGGAGAA GAAGTAAAAT AATTTGAGAA GGAATATGAA GAAACTGAAA CTAGCCTGAG AAGGAAGATA CTGAGTCAGA 000160
000161 TGGAGCCATT TATATATGGA GATCCAGGAT TTATAAGATC CATACCATTG AATTTGAAGT AAGGATACGA TCAAGCTGAT 000240
000241 AATCCAAAGT GCACTAACTT CTAAGGACGG AAATGTTTCT CTGGGGCTAT CATTGCACCC TCGCTCTCTG GAATTTCGGT 000320
000321 ATCATGAGAA CACATAAGTA AGAGCCAAAA TTCATAGGGA TTCTGCCTGG AGAGGAACAC AGGGATTCTG AAATAACCAT 000400
000401 GACATACATA AGTACCTCCA ATTATTTGCC TCTCAGACAA AGCCAGCAGC TGTTGAAATA TGGTAAGAAA AATGGTTCAG 000480
000481 GGGTTTTCCC CCATGACTCA AGACAAGCAT TTACATTATT TACACACTCA ATGTCTCTTC TGACTTATGA TTGCCTTACA 000560
000561 ATCTATGGAA TATATTTAGT GTCCCTGTGG AAGCAATTAT ACATGAAACA TCAACATATA TTTATATAGT AGACAGCACT 000640
000641 TTCATAGGTC CCTGCAGTGT ATTTTAACAG TAGTGGAAAC TAAAGTTTTG GTGTAATGTG TTTTTATCTA TCATTCAGAT 000720
000721 CAAAGAATAC CCAGTACTTG AAAAGTTTAG AAAGCAGTTG AAAGTTACAT AGA
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Predicted Small Protein

Name ENST00000553760.1_smProtein_398:628
Length 77
Molecular weight 8966.3479
Aromaticity 0.157894736842
Instability index 59.7368421053
Isoelectric point 9.56280517578
Runs 11
Runs residual 0.00332728372656
Runs probability 0.0299417064123
Amino acid sequence MTYISTSNYLPLRQSQQLLKYGKKNGSGVFPHDSRQAFTLFTHSMSLLTYDCLTIYGIYL
VSLWKQLYMKHQHIFI
Secondary structure LEEEELLLLLLHHHHHHHHHHLLLLLLLLLLLLLHHHHHHHHHHHLHHHHHHHHHHHHHH
HHHHHHHHHHHLLEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHH
HHHLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTT
TTTiiiiiiiiiiiii