ENST00000555313.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000555313.1 |
Source |
Gencode19 |
Same with |
lnc-LTBP2-1:1,NONHSAT037799 |
Classification |
intergenic |
Length |
603 nt |
Genomic location |
chr14-:75081510..75083350 |
Exon number |
2 |
Exons |
75081510..75082037,75083276..75083350 |
Genome context |
|
Sequence |
000001 CTTTCACTGG GCCAAGAGGA TTAAGGGTGG CAGAAAGTTC TGATAACTCC ACATCTCCAG GTACATGAGC TCCAGGTTCT 000080
000081 GCAGAAACAG TGGTGAGCAA CGCAGACAAG ATATCTGTTG CTTTAGAGCT GTCATTGTGG TTTGGGAAGT CAGACAAGAA 000160 000161 ATGATTTTAT AGGTTGTTGA ATAGGACTTT TCCTCTGCTC TTGGAATATC TGCTGAAGCC ACAAAGATAG AACAATGAGG 000240 000241 GCTAAATATT CTTGCATTCT GAAGAGAAGT ACTAGACACC TTACTAAAGG CAGAACAGGT TCAACAGCAA TCAAACTACA 000320 000321 TCCCTCAATT CCAGTCTACA AATGAAAGGG ATTGAAGAAA GTCACTGAAG CATAACACTG CTGCATTTGT GGGCAGGGCT 000400 000401 GAGATTTCCC CTGAGGGAAC TCCCCAACTC AAACCAAATG AAGGGAGCTC CCAGAGAGAA CCAGTCATCT GCAAGAAGAG 000480 000481 GAGGCTCTGT CCCTATAACT GTCCCCCCAC TGATGCTGAC TATGTTGCTG GATGTTACAG GCACCTCGGT GCATTAAACT 000560 000561 ACAGCAAGAC AGTTCATGGG AGAACCCAAC ATATGTCTTT AGG |
Predicted Small Protein
Name | ENST00000555313.1_smProtein_437:556 |
Length | 40 |
Molecular weight | 4105.7638 |
Aromaticity | 0.0 |
Instability index | 46.6256410256 |
Isoelectric point | 10.7366333008 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0214184773008 |
Amino acid sequence | MKGAPRENQSSARRGGSVPITVPPLMLTMLLDVTGTSVH |
Secondary structure | LLLLLLLLLLLLLLLLLEEEELLHHHHEEEELLLLLLLL |
PRMN | - |
PiMo | - |