ENST00000555934.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000555934.1

Source

Gencode19

Same with

lnc-SYT16-2:6

Classification

intergenic

Length

1184 nt

Genomic location

chr14+:62593962..62595255

Exon number

2

Exons

62593962..62594630,62594741..62595255

Genome context

Sequence
000001 TACCTAAATC TTTCATTTAC TTAGAACACC ATTAAACCAT GTGTTAGGAC GATGGCTACA CCATAATCAT ATCATAGAGT 000080
000081 GTTTTGTCTA CAGATACACC ATTATTTCTT TAAAGTGTAA TTGGGCTGCC AACTATTTTA TGCCAGTTTG ATTAACCTAG 000160
000161 TGACACTAAA TGATCTCTCT GTATTAGGCA GTTTAACTAA AAGAATGATG AAAAATTTCT TTTCTCCTCC CATTACATTC 000240
000241 CATTTCAAAT TTGGGTGTGT TTTGACATTA AATGGCATGA AATAAAATAG TATATTGGTA TTTGACTTCT GAGGGGCTGC 000320
000321 ATAAGGAAAT AAACATGAGT ATCCTATCTA GAACATCTGT TTTGGGTCTG AATGGTGGTA TTTTCCTGCC TGCAGGCTTT 000400
000401 TCAATCCAGG GCAGTTGTCA CTGCTTCACC ACGTTGAAGG GAGAATACCA ATTTCCAGGA TCACCAGTTT ATTTTTATAG 000480
000481 ATAAAAGTTA TATTATAAGA TACTATTTGC CACAATAAAA TCTAACCTTT CCCCAATTAT TTTATTTGTT TAGCTTATCC 000560
000561 AACAAAAGTA TTAACATATA CATTAACAAC GTCGAAAGTA GCCTACTTTA AGAGAAAATA TGCAGAAGAA GAAGATTTAC 000640
000641 ATCAAGATTA CCATGGGTAT TTTCCAAAAC ACCTGATATT ACCTGAGGAC AGAACTTGCA TTCTCAAACT TTCTCTGGAG 000720
000721 AAGCTCAGGT TTCTTGAAGA CCCAGAAACC TACTTAAGAA GGTCTGTGTT AATTAACAAT TTGCTGAGGA AGATACATCT 000800
000801 AGAGACGGAG AAAGAGAGCT ATGAATACTT TAAAGAAGCT CCCTGTTATA AGACTGCATA TTCTGATACA AGAAAACGGC 000880
000881 TGAAGTTTAT GGTACAGGAA TGCTGTTCTC AGTCTCTCTA TTATGAAGAG CTGCATTCGT ATCATATTGT GCCTTATGCT 000960
000961 TCGGAGAATG CCATTTATGA AATGGGCTAC ACTAGCAGCC ACTTGGAGCA AAATTCTCAG TTGCTTATTT ATAAAATGAA 001040
001041 TTAAAGTAAC TGTTAAGTCC ATTGATACTT TGTTTCTAAA TGCTTGAACT GTTTATAGTG AAGATGTTAA TATAAGGCAC 001120
001121 TCATTACCAG TGCACTTGAT ATCAAAGATG AGATGCATGC TGAACTGATT GGAGAGAGCA ATGG
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Predicted Small Protein

Name ENST00000555934.1_smProtein_371:436
Length 22
Molecular weight 2297.6979
Aromaticity 0.0952380952381
Instability index 93.1285714286
Isoelectric point 10.3469848633
Runs 6
Runs residual 0.0394557823129
Runs probability 0.0347406229759
Amino acid sequence MVVFSCLQAFQSRAVVTASPR
Secondary structure LEEEHHHHHHHLLEEEELLLL
PRMN -
PiMo -