ENST00000556163.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000556163.1 |
Source |
Gencode19 |
Same with |
lnc-RP11-204N11.1.1-2:4,NONHSAT039577 |
Classification |
intergenic |
Length |
821 nt |
Genomic location |
chr14-:98099681..98152964 |
Exon number |
4 |
Exons |
98099681..98100028,98103820..98103972,98112499..98112549,98152696..98152964 |
Genome context |
|
Sequence |
000001 TAGCAGTATG GAGAGGTAGA GCCTTGAAGA GGTGATTGGT CTGCCCTCAT GAATGGATTA ATCCATTGAT GGATCAATGG 000080
000081 GTTAATGGAT TATCATAGGA GGGGAACGGG TGGCTTTATA TTAGGAGGAA GAGATACCTG GGCTAACATG CTCCACTTCC 000160 000161 TCATCATGTG ATGTCCTGTG CTACCATGAG ACTCTACAGA GTTCCCAGCA GCAAGAAGGC CCTGAGCAGA TATGGCCCTC 000240 000241 TGACCTTGGA CTTCTCAGCC TCCGTGACTA ATGAAGAAGG AGAAGTCAAC ATTTGGGAAG TGTTTACCAT GGACCAGGAG 000320 000321 TCTCCGGAAA CTCGAAGATT ACAAGCAGAA AACTAGCCTG ATACACTTAG CATATGCAAA TGCTGTGCCA GAGAGACCAC 000400 000401 CAAAGCTTGG ATTCCTCCTT CTGACTCTCC AGAGATATAT AGGGGCAAGC CTTTCAACCA GGGCAGAAGG ATTGGTCTCA 000480 000481 GTGATTTTGC AGAAATCGTA ATTGAAGAAA ATGATGGAAA GGAAGCTTTG AATATGGAGT GTTGTTATTG CACTGACTGG 000560 000561 ACAACCAGAT GGAGCTATTC CCAGTCCCCA GCACACAGAT AGAGAATCTA TTCGACAATA ACTAAAGAGG TGTACAGTTC 000640 000641 TAGAACATTC TGCAACCAGA CTTCAGGCAC CAGGAGGCCT CCGTAGGCAG GGTTCCTCGG GCTTCTCAGC TGGCTTCCTT 000720 000721 GGAGAAATTT CATATGCTGA TTCCTTTCAA TTATCTGTCA ATTTTCAAAA TGCAAATAGA AACATGCAGT CATCACTTTG 000800 000801 GTACTCACCA GCTGATTTCT T |
Predicted Small Protein
Name | ENST00000556163.1_smProtein_170:355 |
Length | 62 |
Molecular weight | 6971.7522 |
Aromaticity | 0.0819672131148 |
Instability index | 65.6983606557 |
Isoelectric point | 4.93157958984 |
Runs | 12 |
Runs residual | 0.0439042773695 |
Runs probability | 0.045736913384 |
Amino acid sequence | MSCATMRLYRVPSSKKALSRYGPLTLDFSASVTNEEGEVNIWEVFTMDQESPETRRLQAE N |
Secondary structure | LLEEEEEEEELLLLHHHHLLLLLLLEEEEEEEELLLLEEEEEEEEEELLLLLHHHEELLL L |
PRMN | - |
PiMo | - |