ENST00000556815.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000556815.1 |
Source |
Gencode19 |
Same with |
lnc-DAAM1-3:3,NONHSAT037160 |
Classification |
intergenic |
Length |
752 nt |
Genomic location |
chr14+:59295006..59484046 |
Exon number |
6 |
Exons |
59295006..59295273,59360861..59361049,59376981..59377060,59415031..59415059,59475749..59475868,59483981..59484046 |
Genome context |
|
Sequence |
000001 AAGGCTGCAA ACGAAGCCAG AAAGATGGTG GCCAGCACAC CTATGGCAAC TATCACCACG GTCTCCATGC TTCCGGGGAG 000080
000081 CTCCTGACTC AGTCCCGTTC ACATCGTCCT CATGGGCTAA GGCTGCTGGA AGTGGCAAAC TGGGGGAAGA GGATGGCAGG 000160 000161 AGCTAGGTTC CTCCACGACA CCTCCAGAGA CCTGAGGGCC TCAAGCTGCA GCTCCGGGGC ACATCCCGCT GCGCTCCCAC 000240 000241 GACGGCCCCG CGGATGGCAA AGTCAGCGGC ATCGCCTATG CAGGCAATCA AAGGATGTTG ATGGATAAGT GTTTCAGGCA 000320 000321 GAATAATGGC CCTCAAAGAT GTTGACACCA GAATCTTCAG AACCTTTGCA TATGTTACCT AACATGACAA AAGGGACTTT 000400 000401 GCTGATGTGA TTAAGGTTAA GAACTTTGAG AAGGGAAGAT TATCCTGGAT TATACAGGTC GACGTTTATT TCTTTCTGAA 000480 000481 CTTTCCTGGA GGATCATCGG CCATACTCCA GCAGAAGGGT GGATTTGAAA AAATAACGTT TCCACGGCAA CAGTGGCAGC 000560 000561 AATTCAAAGG AAGACGTTGG AGAATTCACA TGCTATTTTA GCTGGCTCTG TGATTGCAAT CACACAAATC ATTACATTCC 000640 000641 AGCGAGATCC CATCAACAGA AGGTTTTTCC ATTTCAGTCT GTCAAGTTTT TCAGGCATGA ATACTGTAAG CAAGAAGAGA 000720 000721 AAAGTTACAA TAAATTGACA TTTATAGTTG AA |
Predicted Small Protein
Name | ENST00000556815.1_smProtein_152:307 |
Length | 52 |
Molecular weight | 5687.3041 |
Aromaticity | 0.0392156862745 |
Instability index | 71.1882352941 |
Isoelectric point | 11.4669799805 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.038105332223 |
Amino acid sequence | MAGARFLHDTSRDLRASSCSSGAHPAALPRRPRGWQSQRHRLCRQSKDVDG |
Secondary structure | LLLLEELLLLLHHHHLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |