ENST00000557101.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000557101.1

Source

Gencode19

Same with

lnc-CTAGE5-3:1,NONHSAT036558

Classification

intergenic

Length

547 nt

Genomic location

chr14+:40856762..40858344

Exon number

2

Exons

40856762..40857244,40858281..40858344

Genome context

Sequence
000001 TTCTGCTTTA GAGCATGTAA AAAATTAGAG ATAACAAAAT GACACTTAAT AGACGCTGGA CATGTAGAGG GAAATGTAGC 000080
000081 TTTTAAAGAC ATTTTTCTTC TATTCCTGGC AAAAGTAAGC GAGGGAAAGG TGAATGTAGC AGGTACAAAT CACACAGGCA 000160
000161 GAAAATACAG AGGAAAGACC TAAAGCCTAA CTCAATTCTA TGGATTTTAA TTATGGAAAT CTGGCCAAGT CACTCCCCTC 000240
000241 CTTGCAGGGA TTGTTATTAC TTTATTATGA AAAAATTGAA ACAGTTGTCT TCTCTACTGC ACAGGGTTGT GGCAAAAACA 000320
000321 AAATGGCATT GTGAATGTAA AAGTTCATTA AAAACTCTAA AATGTGATAG CATAATGTAA ACCACTTTTT TTTTTTTTTT 000400
000401 TTTTCCAAAA CGGAGTCTCG CTCTGTCGCC CAGGCTGGAG TGCAGTGGCG CGATTTCGGC TCACTGCAAG CTCCGCCTCC 000480
000481 CAGGAGGATG GCTTGAGCCC AGGAGTTCAA GACCAGCTGG GTCAACAAAG TAAGACCTCG TCTCAAC
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Predicted Small Protein

Name ENST00000557101.1_smProtein_212:379
Length 56
Molecular weight 6529.8103
Aromaticity 0.0909090909091
Instability index 53.6109090909
Isoelectric point 9.30145263672
Runs 9
Runs residual 0.0121212121212
Runs probability 0.0399517164222
Amino acid sequence MEIWPSHSPPCRDCYYFIMKKLKQLSSLLHRVVAKTKWHCECKSSLKTLKCDSIM
Secondary structure LEELLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLEEELLLLHHHLLLLLLL
PRMN -
PiMo -