ENST00000557966.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000557966.1

Source

Gencode19

Same with

lnc-RP11-809H16.2.1-1:1

Classification

intergenic

Length

1117 nt

Genomic location

chr15+:69222843..69321229

Exon number

4

Exons

69222843..69223056,69267068..69267171,69318868..69318991,69320555..69321229

Genome context

Sequence
000001 GCTTGCGCGC TGGGGACAAC CGTTGCTGGG TGTCCCAGGG CCTGAGGCAG GACGGTACTC CGCTGACACC TTCCCTTTCG 000080
000081 GCCTTGAGGT TCCCAGCCTG GTGGCCCCAG GACGTTCCGG TCGCATGGCA GAGTGCTACG GACGACGCCT ATGAAGCCCT 000160
000161 TAGTCCTTCT AGTTGCGCTT TTGCTATGGC CTTCGTCTGT GCCGGCTTAT CCGAGGTCTC AATCCATTGC GCCCAGGCTG 000240
000241 GTATGCAGTC ATGTTGTATC TGGAATTGGT GGGTTCTTGG TCTCACTGAC TTCAAGAATG AAGCCGCAGA CCCTCGTGCA 000320
000321 CCATGAGTGC CGAGGAGGAT GCCAGGTGGC TCCGGTGGGT GACTCAGCAG TTTAAGACCA TTGCAGGAGA AGATGGGGAG 000400
000401 ATCAGCCTGC AAGAATTCAA AGCAGCTCTG CATGTGAAAG AGTCCTTCTT TGCAGAGCGA TTCTTTGCCC TATTTGACTC 000480
000481 CGATAGAAGT GGCACCATCA CCCTCCAGGA GCTGCAGGAG GCACTGACCC TGCTCATCCA TGGCAGCCCC ATGGACAAAC 000560
000561 TCAAATTCCT CTTCCAGGTG TATGACATCG ATGGTAAGGG CTCTTCCTGG GTGTGGGCTG GGGTGGGGAG ATCAGTGGGC 000640
000641 CTCAGTGAGA ACTGGCCATT TCACCTTGGC AGGCCTGGAG GTGCCATCCC GGCCTCCTGA GCCCAGCCTG GGACTGGTTT 000720
000721 CTCCAGGTGA GGCTGACACT TCCTTTCCTC ACATCTCTCT CCCAGTCCCC AGTCTCTCTG TCTAATCCCT GCCCCCCTTT 000800
000801 CTGGGGCAGC AGGGAGAAAA GGAGGGACTC TGGCACAGGA GACAAATGCC TTCTATTCAA CTTACCAGAG GCCAGAACCT 000880
000881 TTTTCTGATC TTTTCTATGT CTGAAAAAGA AAATCTCTGT TGTTTTTTCC TTTTCCTCAT AGTATAAGCT CACTATGAAC 000960
000961 ATTTTAGACA ATACAGAGTG GTATAAAAAA GAATACAAAA ATCACCCGTA ACATTTTGCT ATATTGCCTT CTAACTGGTT 001040
001041 GCACATACAC ACGCCACACA CCTTTTTTTT TTTAACAAAA TGGGATTAAA AAATGAATCC CATTTTTTAA TGGGATT
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Predicted Small Protein

Name ENST00000557966.1_smProtein_539:784
Length 82
Molecular weight 8448.4976
Aromaticity 0.0617283950617
Instability index 56.6444444444
Isoelectric point 5.99493408203
Runs 11
Runs residual 0.00637723816532
Runs probability 0.0457757222464
Amino acid sequence MAAPWTNSNSSSRCMTSMVRALPGCGLGWGDQWASVRTGHFTLAGLEVPSRPPEPSLGLV
SPGEADTSFPHISLPVPSLSV
Secondary structure LLLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLEEEEELLLEEEELEEELLLLLLLLLLLL
LLLLLLLLLLLEELLLLLLLL
PRMN -
PiMo -