ENST00000558175.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000558175.1

Source

Gencode19

Same with

lnc-JAG1-5:8

Classification

intergenic

Length

696 nt

Genomic location

chr20-:11781111..11791074

Exon number

2

Exons

11781111..11781559,11790828..11791074

Genome context

Sequence
000001 TGTGCTGAGG ACTACATCAG TCTCCTGCAA TTATCATCTA CACTGAAAAA CAAAGAGGAC AGAGGCGAAG CTAGTGGCCC 000080
000081 TCACCATCCC CTGCAAGCTG ATTGCTTCTT ACTGCAAGCA CTTGAGCATC TTCCTGAGAG CTTTCTTGGG CAATGGGAAC 000160
000161 CAGGCTTGGC CCAATCACAG GCAGGTGAAG TATGAGGAAA TGGAGAAGGC ATTGTCCAAG GAGCAGTCTT CAACCTTCAC 000240
000241 CCCGCAAACG GAATCTCACT CTGTCTCCCA GGCTGGAGTG CAGTGGTGCG ATCTCGGCTC ACCGCAATCT CCGCCTCTCG 000320
000321 GGTTCACGCC ATTCTCCTGC CTCAACCTCC AGAGCAGCTG GGACTACAGG TTCCTGCCAC CACGCCCGGC TAATTCTTTG 000400
000401 TATTTTTAGT AGAGACGGGG TTTCACCGTG TTAGCCAGGA TGGTCTAGAT CTCCTGACCT CGTTATTTGC CTGCCTGGGC 000480
000481 CTCCCAAAAT GCTGGGATTA CAGGCGTAAG CCATCACACC CAGCCGGCAC AGTGCTTTTA AGCATATGGT TGATCCATAT 000560
000561 GGTGGCAGTG TCATTACTTA ATTTTTTTAA TAGTTGAATA ATATTCCATT GTGTGGATAT ATAACATTTA AAAAATCAAT 000640
000641 TTATAAATTG ATGGACATTT GGATTATTTC CACTTTTTGG CTATTGTAAA TAATGG
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Predicted Small Protein

Name ENST00000558175.1_smProtein_191:433
Length 81
Molecular weight 8833.078
Aromaticity 0.025
Instability index 89.3075
Isoelectric point 11.8013305664
Runs 8
Runs residual 0.0388157894737
Runs probability 0.0486442324678
Amino acid sequence MRKWRRHCPRSSLQPSPRKRNLTLSPRLECSGAISAHRNLRLSGSRHSPASTSRAAGTTG
SCHHARLILCIFSRDGVSPC
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLEELLLLHHHHHLLLLLLLLLLLLLLLLLLLLLL
LHHHHEEEEEEEELLLLLLL
PRMN -
PiMo -