ENST00000558568.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000558568.1 |
Source |
Gencode19 |
Same with |
NONHSAT051137 |
Classification |
sense |
Length |
564 nt |
Genomic location |
chr15+:101402129..101425534 |
Exon number |
3 |
Exons |
101402129..101402547,101407563..101407644,101425472..101425534 |
Genome context |
|
Sequence |
000001 AACACAGGCC CCCGGCGGCT GGAGTCGGCT CATGGGTTGC TGGGGGGCAG CTGGTGCCAG CCCTGCTAGA CATGTCCAGG 000080
000081 GTCGGGGCAG AGGCCAGGGT GGCTCTCATC CACAACGAGG CTCCAGGAAG AGGCTCCAGA GGGCCCAGGT CCCTGGAGGA 000160 000161 AGACAGAGGG TGGATTATCC AGTGAGTCCT CAGATTGCTC CAGGGAGACT CTACCCCTAG GCCCTCATCC TACCTAGGAC 000240 000241 TGAGGCAGCC ATCTGGGTCT CTGCTTCCCT AACCACTTCC TCCTCCACCC GACCATCACC TAGTCTCAAG GACTTGGGCA 000320 000321 GCTTCTGGAA GTGGCTGAGA CTGGAAGAAT GTTGTCACAC CTACCAGATA TCCCTACGTG TATCTCTACC ACCCCCACTA 000400 000401 CATATTCTGA AGAACCAAGG TGCAACAGGA ACCTGGAGCC TCAAGAGCCG AGGTGCTCAG GAGGGGCAGC ATGACTCCAG 000480 000481 GGCTCGGAAG GAGCCCCTCA GATATTTATC AACAATGAAT GGCACGAATC CAAGAGTGGG AAAAAGTTTG CTACATGTAA 000560 000561 CCCT |
Predicted Small Protein
Name | ENST00000558568.1_smProtein_71:184 |
Length | 38 |
Molecular weight | 4072.5303 |
Aromaticity | 0.027027027027 |
Instability index | 60.6351351351 |
Isoelectric point | 9.13214111328 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0196330784567 |
Amino acid sequence | MSRVGAEARVALIHNEAPGRGSRGPRSLEEDRGWIIQ |
Secondary structure | LLLLLHHHHEEHHHLLLLLLLLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |