ENST00000558568.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000558568.1

Source

Gencode19

Same with

NONHSAT051137

Classification

sense

Length

564 nt

Genomic location

chr15+:101402129..101425534

Exon number

3

Exons

101402129..101402547,101407563..101407644,101425472..101425534

Genome context

Sequence
000001 AACACAGGCC CCCGGCGGCT GGAGTCGGCT CATGGGTTGC TGGGGGGCAG CTGGTGCCAG CCCTGCTAGA CATGTCCAGG 000080
000081 GTCGGGGCAG AGGCCAGGGT GGCTCTCATC CACAACGAGG CTCCAGGAAG AGGCTCCAGA GGGCCCAGGT CCCTGGAGGA 000160
000161 AGACAGAGGG TGGATTATCC AGTGAGTCCT CAGATTGCTC CAGGGAGACT CTACCCCTAG GCCCTCATCC TACCTAGGAC 000240
000241 TGAGGCAGCC ATCTGGGTCT CTGCTTCCCT AACCACTTCC TCCTCCACCC GACCATCACC TAGTCTCAAG GACTTGGGCA 000320
000321 GCTTCTGGAA GTGGCTGAGA CTGGAAGAAT GTTGTCACAC CTACCAGATA TCCCTACGTG TATCTCTACC ACCCCCACTA 000400
000401 CATATTCTGA AGAACCAAGG TGCAACAGGA ACCTGGAGCC TCAAGAGCCG AGGTGCTCAG GAGGGGCAGC ATGACTCCAG 000480
000481 GGCTCGGAAG GAGCCCCTCA GATATTTATC AACAATGAAT GGCACGAATC CAAGAGTGGG AAAAAGTTTG CTACATGTAA 000560
000561 CCCT
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Predicted Small Protein

Name ENST00000558568.1_smProtein_71:184
Length 38
Molecular weight 4072.5303
Aromaticity 0.027027027027
Instability index 60.6351351351
Isoelectric point 9.13214111328
Runs 7
Runs residual 0.009422266303
Runs probability 0.0196330784567
Amino acid sequence MSRVGAEARVALIHNEAPGRGSRGPRSLEEDRGWIIQ
Secondary structure LLLLLHHHHEEHHHLLLLLLLLLLLLLLLLLLLEELL
PRMN -
PiMo -