ENST00000559614.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000559614.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intronic(AS) |
Length |
937 nt |
Genomic location |
chr19+:19717159..19719469 |
Exon number |
2 |
Exons |
19717159..19717574,19718949..19719469 |
Genome context |
|
Sequence |
000001 AAAGCAGGGA CCTTTGTGCT TCAACTGCAG GAAGTGAATT CTTCCATCAA CCATGCGACA CTGGGAGAGA ACCCCATGCT 000080
000081 CTGGATAGGA ACATAGCCCA GCCAACACCT TGACTGCAGC CCTGTGAGAC CCTAAGCAGA GGACCTAGCT AAGCTGTGCC 000160 000161 CAGAATCCTG ACCCAAGGAA ACTGTGAGAT AATAAATATC TGCTGTTTTA AGCTGCTAGG CTTGCGGTGA TTTCTTATAA 000240 000241 AGCAATAGAG AGTTGATAAT GAGATAGACT GGAAGCCAGA GAATGGGGAC CGTTGGGAGA AAAATGGGGT TGGTGCTGGT 000320 000321 ATGTCTAACA AGTATATGAC ACGTTATGGC TGGGTGCCGT GGCTCATGCC CGTAATCCCA GCACTTTGGG AGGCTGAAGC 000400 000401 GGGCGGATCA CCTGAGGTCA GGAGATTGAG GCCAGCCTGA CCAATATGGT GAAACCTCGT CTCTACCAAA AATGCAAAAA 000480 000481 TGAGCCAGGC TGTGGTGACC AGCGCCTGTA ATCCCAGCTA CTCAGGAGGC TATGACAGGA GAATCGCTTG AGCCTGGGAG 000560 000561 GCGGAGGTTG TGGTGAGCCA AGATCGTGCC ACTGCACTCC AGTCTAGGCA AGTGAGACCC TGTCTCAAAA AAAAAAAAAA 000640 000641 GGAAAGAAAA CTGAACTCCC ACCTGGGCAA CAGAGTGAGA CTCCGTCTCA AAAACAAAAC AAAACAAAAC AGAACAAAAC 000720 000721 AAACCAGGAC AAATACCTTA GAAAGGTCAG AATACTTTGC AAAGTACTTA CACTGTACAA GTCTGGAACA AACCGCGTGC 000800 000801 TCACTCCTTA CCTGGCAAGG AGTTCAAGGC CATGCTTGGT CGGACAGCAG CTGAGGCAGG CAGTCACCCC CGAGTCTCCC 000880 000881 TTCCAAGGTC ACGCCCACCA CTCATGCCCG ATGGGACCAC AATGCATGCC TTCATGC |
Predicted Small Protein
Name | ENST00000559614.2_smProtein_320:439 |
Length | 40 |
Molecular weight | 4517.2625 |
Aromaticity | 0.128205128205 |
Instability index | 116.717948718 |
Isoelectric point | 9.68768310547 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0449819567466 |
Amino acid sequence | MSNKYMTRYGWVPWLMPVIPALWEAEAGGSPEVRRLRPA |
Secondary structure | LLLLLLLLLLLLLHHHLHHHHHHHHHLLLLLLEEELLLL |
PRMN | - |
PiMo | - |