ENST00000559839.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000559839.1 |
Source |
Gencode19 |
Same with |
lnc-GABARAPL3-4:1,NONHSAT048405 |
Classification |
antisense |
Length |
807 nt |
Genomic location |
chr15-:91147457..91157790 |
Exon number |
3 |
Exons |
91147457..91147695,91150009..91150104,91157319..91157790 |
Genome context |
|
Sequence |
000001 AAGGTATTGA AAGGTTATGT CCACTAATCA GCATCCCACT CCAATATAGG TAGGTAAAAT CAGTTCATAC CTTCCCCATG 000080
000081 TCCATTATTC TCACCATCAC AGAAACCTAG CGGGAAAGGA AAAAGAAAAA AAGAAAACAC TTTTATGTGG TACTTTCATT 000160 000161 TTCATGAATT TATGAATCAG TAACTCTTTA TGATTTGAAA TAGAATTTTG AAAATTCTAA GGCACTTTTG ATACACTGAT 000240 000241 TTTCATTTAA GGTGCTTTAT CATTTATACT AAAAATAGGT ATAGCTAATT TGAAACTAAA TTTGGTTCCT TTTTCTTTTC 000320 000321 CTTTAAAATT GTCTGTCTGA AATTTTCTTA CTGTCACTGT CCTGAGAGGA GAACAATTTT TACAAAGCCT GAGAATCTCT 000400 000401 ATTCAAACCA CAAAGTAAAG AAGTATAGAT GGAAATTCTC TTCCAAATGC TTCATCATGG GGTTAAGAGC AGCACGGCGG 000480 000481 GCTTCCCCAG CGGCCACGTG AGGTGTGATG CCCCCACCGC TGAGCGCAGG CACAGACCAC CCAGCTGCCT TGGAGGGATT 000560 000561 TGTAAAAGGA AACAACCCAT GTACCTGTTA AGTGCAGATG TCAGCCTGAA CCCAGGATGC TTTTCGTCTT TCCAAGGAGG 000640 000641 CTGCTGCCTT TAAAAACCAG AACAACATAA AAGGAAAAGA AGTCAATCCA CAGACAGCAA AGGAGGGCCT CAGCACTTGC 000720 000721 ATTTGAGAAC TGGCTCTTCT ACTCACCTCG CTCTGCAAGA GTTACTTAAA AATACCCCAC ACCTCGCTCA TTTTGCTCAT 000800 000801 CATTGTT |
Predicted Small Protein
Name | ENST00000559839.1_smProtein_428:652 |
Length | 75 |
Molecular weight | 8021.2755 |
Aromaticity | 0.0675675675676 |
Instability index | 69.6932432432 |
Isoelectric point | 8.91534423828 |
Runs | 13 |
Runs residual | 0.0330257086355 |
Runs probability | 0.0305735599853 |
Amino acid sequence | MEILFQMLHHGVKSSTAGFPSGHVRCDAPTAERRHRPPSCLGGICKRKQPMYLLSADVSL NPGCFSSFQGGCCL |
Secondary structure | LHHHHHHHHLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLEEELLLLEEEEEELLLL LLLEELLLLLLEEL |
PRMN | - |
PiMo | - |