ENST00000561719.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000561719.1

Source

Gencode19

Same with

lnc-CDYL2-2:1,NONHSAT143896

Classification

intergenic

Length

755 nt

Genomic location

chr16-:80601000..80606705

Exon number

3

Exons

80601000..80601413,80601845..80602010,80606531..80606705

Genome context

Sequence
000001 ACAGTTGGAA TTTTGTTCTA AGGATGATGG AAGCCATTGG AAGGTTTTCT TTGCCAAAGT GATGTGATCT GATAGAAGGT 000080
000081 TTTATGAAGC CCACGTTGTC TACTGTGCAG AGAATGGAGT AACAGGCCAA GAGGAACCGT AGGGAGACCA GTTAAGAGGC 000160
000161 AGAGACAGTG AAGAGGCAAA TATAATTTCT GACCTACGTA ATGATGTATG CACAAGAAGC CTCTCTTGAA TGTATTAATT 000240
000241 CAGTAAACAG TTATGGAGTC CTTACAATGT GCTAGTGGGA CTTTGAAGAT GAATCCAAAT TTGGATCCTG GCCTGGAAAG 000320
000321 GCTCAAAGCC CAATATGGGA GGGTCTCACT CTTATCTTCG TTCTTCTCCC CGCACTCCCA CCACCTTACT TACTCCCATG 000400
000401 GCATGCTACA TCCTTGAATA AATATGCCCA AGGCAGATGT GGTAATGAAG ATTGGTTGAG AATTCTGAAG GCAGACGTCC 000480
000481 CAGACGCCAA TCACACAATT TCTCTGTGGC TCACTTTTCT TATCTGTGAA AAGGGAGCTA GTTACCACCA GCCCCAACCC 000560
000561 CAATCCTCTT CCCACCTCAC AGAATGGGGA GAGGATTCAG TGGGCAGTCC CTGGCATAGG GGTCACAGAA TCTACACCAC 000640
000641 CAAATATCAT TCATATTCTA ATTCTGTATT CTGTGTCCCC TATTGCCCCA AGATAAGTTC ATTTAAAACA AAAAAGCTTC 000720
000721 TATCTCAGGT AGAAAACCCA TCATCACTGG GCATT
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Predicted Small Protein

Name ENST00000561719.1_smProtein_200:274
Length 25
Molecular weight 2658.0756
Aromaticity 0.0833333333333
Instability index 50.9125
Isoelectric point 3.79461669922
Runs 5
Runs residual 0.0267857142857
Runs probability 0.0380321497969
Amino acid sequence MMYAQEASLECINSVNSYGVLTMC
Secondary structure LLHHHHHHHHHHHHHLLLLLEELL
PRMN -
PiMo -