ENST00000562493.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000562493.1

Source

Gencode19

Same with

lnc-UQCRFS1-8:1

Classification

intergenic

Length

3666 nt

Genomic location

chr19-:28248092..28251757

Exon number

1

Exons

28248092..28251757

Genome context

Sequence
000001 CACTACCCAT GGACCCCAGG CAGTCTAATT ATAGAGACAA TTGAATGACA CCACACATTC TAATGGAAGA CACTTCCGGA 000080
000081 TGACCCAGAC ATCCTAATGA TAGAGACACT TGTGCAACCC CAGCCAGCCT AATGATAGAA ACACCTGGGC GACTTTAGGC 000160
000161 ATTCTTACGG GAGAGACCTC CAGCTGACCC CAGTAATTCT GATGATAGAG ACCCCTGGTT GACCCCTGTC ATTCTGATGG 000240
000241 GAGAAACTCC TGGCTGACAA AATGTAGTCT AATGGTAGAA ACATCTTGGC GACCCCAGGC ATTCTAATGG GAGAGACTCC 000320
000321 TGACAAAACT TTGGCATTCT AATGATAAAG ACAAGTGGGC AACCCCAAGC ATTGTAATGG TAAAGACACC TGGGTGATCC 000400
000401 CAGGAATTCT AATGTGAGAG ACTCCTGGCC AACCCCAGGC ATTCTAATAA AGAGACTTCT GTCTGACCAC AGGCTGTCTA 000480
000481 GTGATAGAGA TACCAGGGTT ACTCCAGGCA TTCTAATGAA AGAGACTCCT GGCGGACCCC AGACAGTCTA TTTAAAGTGA 000560
000561 TAACCTGGGC CACCACAGGC ACTCTAATGG AAGAGACTCC TGGCTGACCC CAGGCATTCT AATGGGAGAG AATCCTGGCC 000640
000641 GAACCCAGGC AGCCAATGGA TAGAGACACC TGAGCAAACC CAGGCATTCT AATGAAAGAG ACTCCCGGCC GACCCCAGGC 000720
000721 AGTCTAATAA TAGAGACACG TGAGTGGACA CAGGCATTCT AATAGGAGAG ATTCCTGGCT GACCCAAGCA GTCTAATTAT 000800
000801 AGACACCTGG GTGACTCCAG GCTTTCTAAT AGGAGAAACC CCAGGCTGAC CCTAAGCAGT CTGATGATAG AGGCTTCTTG 000880
000881 GTGACGGCAA GCATTCTAAT GTGAGAGACT CTCGGCCAAC CCCAGGCATT CTAATGATAG AGACATTTGG GAGCCCCCAG 000960
000961 TTATTTTAAT GATAGAGACA CCTGAGCGAC CCTAAGCATT CTAATGGGAG ACAACAAGGC TGAAACCAGG CTTTCTAATG 001040
001041 GGGAGACACC TGGCTGATCC CCAACAGTCT AATCATAAAA AACACCTGGA TGACTCCAGT CATTTTAATG GCAGAGACTC 001120
001121 CCGGTCTACC CCAGGTGTTT TAATGGGGAG ACTTCTGACC GACCCCAGGC AGTCTAATCA TAAAGACAGC TGGGCTAAGC 001200
001201 CAGACAGTCT AATGAAAGAG ATTGCCAGCC GAACACTGGC TGTTTAATTA TAAAGACACT TGGGCAATCC CAGGCGTTCC 001280
001281 AATGGAGGAG ACTCCCAGCT GACCACAAGC AGTCTAATGG TATTGACACC TGGAAGTCCC AAGACATTCT AATGGAAGAG 001360
001361 ATTCCCGTCC TACCACAGGC ATTCTAATGA TAGAGATACC TGGGCCACCC CAGGCATTCT AATGGGAGAG ACTCCTGGCT 001440
001441 GACAACAGAC AGTCTAATGA TAGAGAAACT TGGGCGAACC CAGTATTCTG ATTGGAGAGA TTCTAGGCAG TCTGATAGTG 001520
001521 ACAACTGGGC AACTACAGGC ATTCTAATGG GAGAGGCTAA TGGCTGACCA CAGGCATTTT AATTGGAGAG AATCCTGACT 001600
001601 GACCCAAGGA AATTTAAGGA TAGAGACACC CGGGTGATCC CAGACATTCT AACGGGAGAG ACTCCTGACC GACACCAGAC 001680
001681 AGTCTAATTA CAGAGACACT TGGGCTATCC CAGGCATTCT ACTGAAAGTG ACTCCCGTTT GACTCCAGGC AGTCTAATGA 001760
001761 TAGAAATACC TGGTTGACTT CAGGCATTGT AATGGGAGAG ACCCCCATCC AATCCCAGGC AGTCTAATGA TAGAGACAGC 001840
001841 TGGGCGACCC CAGGCGTTCT AATAGAGTAT CGGCTAACCA CAGGCAGTCT AATGAGAGAG ACAACGTGGA GACCTGATTC 001920
001921 ATTCTAATCA AAGAGACTCC CAGCGAACCC CAGTCATTCT AGTAAAAGAG ACACTTGTCC GACTTCAGGC AGTCTAAGTA 002000
002001 TAGAGACTGC GGGGCAACCC CACACATTCT AATGGGAGAG AGTCTGGGCC AAACCCAGGC AGTCTAATTA TAGGACACGT 002080
002081 GAGCGACCAA ACTCATTCTA ATGGGAGAAA CTCCTGGCGG GCCCCATGCC ACCTAATGAT AGAGACACTT GGACGACCCC 002160
002161 AGGCATTCTA ATGGGAAAGA TTCTTGGCCG ACCCCATGCT GCCTAATGAT AGAGACATCT GAGTGAACCC AGGCATTCTA 002240
002241 ATGAGAGATG CTCCTTGCCT ATTCCAGGCA TTCTAATGAC AGAGACACCT GGGCAACCCC AGGCATTGTA ATGATACAGA 002320
002321 CATGTGGGCG ATTTCAGGCA TTCTAATGAA AGAGACTCCC TGCGGACCCA GGCATTCTAA TGAGAGAGAC TCTCAGCCGA 002400
002401 TCTCAGGCAG TCTAATGATA GAGACACTGG AGTGACCAAA AGGATTTTAA TAAAAGAGAC TACCGGGCAA CCACAGGCAC 002480
002481 AGACAATCTA ATAATAGAGA CACCTGGGTG ACTTTAGACA TTTCAGTGGG AGAGACTCCC AGCCGGCCCC GAGCAATCTA 002560
002561 ATGATAGAGA CACCTGGGAA ACCTCATGTA TTCTAATGGG AGAAACTTTT GGCTGGCCCC AGACATTCTA ATGGGAGAGA 002640
002641 CTGCTGGCCG ACCCCAGGCA GTCTAATGAT AGAGACACCT TGGCCACCCC CGTATTCTAA AGGGAGAGAC TATTGACAGT 002720
002721 CCCCAGATTT TTTAATGATA CAGACACCTG CGTGAGCCTA AGCATTTTAA AAGGAGAGAC TCTTGGTGAC CACAGACATT 002800
002801 CTAATAATAG AGACACCTTG GCGATTCCAG TCATTCTAAT AGGAAAGACT CTCTTCTGAA CCCAGGCATT GTCTTGGGAG 002880
002881 ATAATCCTGG CTGAACCCAG ACAGTCTAAT TATAAAGACA CCTGGGCAAG CCTAGGCATT CTAATGGGAG ATACCTCCCC 002960
002961 AGTGTCCCCA GGCAGTCTAA TGATAGAGAC ACCTTGACGA CCACAGGCAT TATTATGAGA GACACACTTT GCCAAACTCA 003040
003041 GGCAGTCTAA TGCTAGAGAC AATTGGGCGA CAAGCATTCT AGCGGGAAAA ACTCCCGGCT GACCCCAGGC ATTGTAATAA 003120
003121 AAGAAAAGCC TGAGTGATCC CAGCCATTTT CATGGGAGAG ACACTTGTTC GACCCCAGGC ATTCTTATGG GAGGGACTAC 003200
003201 TGGCCAACAC CAGACAGTCT AATAAAAAAG ACATGTAGAT GACCCCATGC ATTCTTTTTT TTTCACACTT TAAATACTTT 003280
003281 ATTTATATAA AAACTCATTT GTTTTTAAAA GCATTAACAA GACAGAAAGA AAAGAGAAAA AGTATGGAGC AGAACACAAG 003360
003361 CCCGTTAGCA GTGTTCGGTG GGAAGGTGGG ATTTTTGGTT CTCTGGAATT GAATGTTTAG TGTTTTTATA AACAAAAGAG 003440
003441 GAAAAAAAAG TTAAAGGTCC CCAAAAGCCC ATGGCTATCC TATTACCCAT ACCCCACTGA GAAGGGAGGG GGCAGGGATA 003520
003521 GCATTAGGAG ATATACCTAA TGCTAAATGA CGAGTTAATG GGTGCAGCAC ACCAACATGG CACATGTATA CGTATGTAAC 003600
003601 AAACCTGCAC GTTGTGCACA TGTACCCTAA AACTTAAAGT ATAATAATAA TAAAATTAAA TATATA
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Predicted Small Protein

Name ENST00000562493.1_smProtein_1037:1246
Length 70
Molecular weight 7761.5882
Aromaticity 0.0289855072464
Instability index 58.9507246377
Isoelectric point 9.81072998047
Runs 7
Runs residual 0.0378820490745
Runs probability 0.0464077522902
Amino acid sequence MGRHLADPQQSNHKKHLDDSSHFNGRDSRSTPGVLMGRLLTDPRQSNHKDSWAKPDSLMK
EIASRTLAV
Secondary structure LLLLLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLHHHHH
HHHHHHLLL
PRMN -
PiMo -