ENST00000563962.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000563962.1

Source

Gencode19

Same with

lnc-ARHGAP17-2:2,NONHSAT141383

Classification

intergenic

Length

766 nt

Genomic location

chr16-:25097654..25122800

Exon number

3

Exons

25097654..25098044,25114672..25114962,25122717..25122800

Genome context

Sequence
000001 GCTATAATTA ACTCAGGGCG GAACAGCTAG CAGAATCCTC AGCGTTCGGG CAAAGGGCAG AGAATCCAGC CAGAAGCAAC 000080
000081 ATGTAGATCT AATGACCTTC TCCAGGAGTC GAGGACCCAC TACCTCGCTG AATTCTCAGA GTCAAAATGC GTCTCTACCT 000160
000161 GCTGGTCCCA GAACAGTCCC CTGCTGCTGC ATTGAATGAA TCTCATCTCA CTTCCTCGAG TCAGCCCTAC CTATATTTGA 000240
000241 TGATCACAAA CCTTATCCTT ACGTTGCCAG CAGTAACATT CTGCATCCCT CACCCACTCC ACTGTGTCCT TTTCCTCCCA 000320
000321 CTGATCTTCA CTCTGCCTTT TCTAGGGGAA CTCTGAACAG TATTTCTGAG AAGGGGATGA AGATCGTCTC CCAAGTAAAT 000400
000401 ATGTTGAGTT TGACTGGGCA CCGTGGCCCA CACCTGTAAT CCCAGCACTT TGGGAGGCCA AGGCGGGCAG ATCACTTGAG 000480
000481 GCCAGGAGTT CGAGACCACC CTGGCCAACA TGATGAAACC CTGTCTCTAC TAAAAATACA AAAATTGGCC CGGCATGGTG 000560
000561 GCATGCACCT GTAATCACAG CTACTCAGGA GGTTGAGGCA GGAAAATCAC TTGAACCTGG GAAGTGGAGG TTGCAGTGAG 000640
000641 CCATGATCAT ACCACTGCAC TCCAGCCTGG GTGACAGAGT GATACTCCGT GTCAATAATT AAATAAGTAA ATAAATAAGT 000720
000721 TGAGGTCAAC TTTCAAATGA TCGTCATGAG AAAGCTACAC AGTATT
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Predicted Small Protein

Name ENST00000563962.1_smProtein_146:355
Length 70
Molecular weight 7737.2102
Aromaticity 0.101449275362
Instability index 58.4550724638
Isoelectric point 5.74176025391
Runs 11
Runs residual 0.0200889654183
Runs probability 0.0716224245637
Amino acid sequence MRLYLLVPEQSPAAALNESHLTSSSQPYLYLMITNLILTLPAVTFCIPHPLHCVLFLPLI
FTLPFLGEL
Secondary structure LEEEEELLLLLHHHHHLLLLLLLLLLHHHHHHHHHHHHHLLLLEEELLLLLLHHHHHHHH
LLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLL
LLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooo
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