ENST00000564305.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000564305.1

Source

Gencode19

Same with

lnc-C16orf72-3:1,NONHSAT140461

Classification

intergenic

Length

5298 nt

Genomic location

chr16+:9449445..9501950

Exon number

3

Exons

9449445..9449637,9495587..9495640,9496900..9501950

Genome context

Sequence
000001 TGGAGGTAAT TGAATCATGG GGGCAGTTTC CCCCATGCTC TTCTCTCGAA AGTGAGTGAG TCTCACAAGA TCTGATGGTT 000080
000081 TTATAAGGGG TTCCTCCCCC TTGGCTCAGC ACTTACCCTT CCTGCCGCCC TGTGAAGAGG TGCCTTCCAC CATGATTGTA 000160
000161 ACTTTCCTGA GGACTCCCAA GCCATGCAGA ACTGGCTTCT ATGAGGCTGT CTTGTAGGAT GCCCATGACG ATCCTCCAGA 000240
000241 CACTAAGATG AGAAAACTAA GGCCCAAAGG GACACCTGGC TTTCCTAAGA CCTGTAAGTG GAAGAGTCAG CATTTGAATG 000320
000321 GAGAACTCGC AGCTTTCGGA GTCTAGACTT GTTTTACCTC ACCAGACTGC TTCTACTCCT AGTGATTCCT TCCCTTAGAT 000400
000401 TAAGCCTTGC TCTCTTCCCG TGCAATCATG AAGAGGATTA TATTAGTAAA TCCCTGAACA TTCCCTGATT GGGGAGTGAG 000480
000481 GGTCAAACCA AGGCAAATGG CAGGATTGAC ACTCACATCA AGGGCTGGCT CATTAAGGGC TCGGGACCTG GCGATCGAGT 000560
000561 TGCATTGCAG ATTTTGGAAG TATGCAAGAC CACGCCAGCC ACCTTTCCAG GGAGAGACCA TGCAAAGAAG GCAGGTGATC 000640
000641 CAAGGGCTGG GAGTGGTGAG GACTGCTCCA GCCCCTGAGC AGCTGTCATC CCAGCACAAA GTGTCAGAAG AGACCTCAAA 000720
000721 GTGTGGTCTG CAGACGAGGC AGCATCTGCA TCACCTGGGA GCTTGTTAGA AATGCAGAAT CTTCTGAGAG AACCAGACCT 000800
000801 GCTGCATCAA AATCTGCATT TTAACAAGAT TGTAACTTAG ATACACAGTA ACACTTAAAA AGGATGGGGC AGAGAGGCTA 000880
000881 AGTCAGCAGC TTCTCATCAC ACTCCAATCT GATGCTGCTA GTGCTCCAAA AAGCTCTCAT ATCCTCACTG ACTAGCCTAG 000960
000961 GGCTGTGTCT ATCAATGCAT TATATGACAC AGATGAAGAC TATTGTGTAC CTTCCTCAAT TTTTACCCCA TTGTTTCAGC 001040
001041 CTTTTGTACA TCTTTAATGC AAACATCCAT GCGAGAATTC TTGTGACATT AATTTTTTGG AACAACCTGT TTTGCAGAGC 001120
001121 AAATTTCATT AAGCCATTTT AATCCAGAGT TTAATTTTTT ATACAGCTCG ACTCAATCAT TTCCATTTTT TTTCCATTAG 001200
001201 AATGTCTATT TGTAGTAACA TTATTTTCAT GGGATCAATT ATTTTCTGTT TAAATTTACA ACAGGCATTT GACTCATCAG 001280
001281 TCTCTTTTTA TATACCATCT TTTTGCTGAT TCTGACTTCT GCTATTTGGA GAGGTTTTCT TGTTTGTGTG TTTGATTCTT 001360
001361 TTGTGGCCAT TCTTTCTATT AAGTGAAAAT CGTCTGGATC AAATTTTGTA GATTTAAATT TTGTTATTAG TGATACCTGT 001440
001441 TTTTTTTCCC TGTCAATTTT AGCTCATTAC ACATTCTAGT CATTTTAACC CTGCTAGTTT TGTTAGTTGC TGATCACTTT 001520
001521 TACCATACCA GTAATACGTG GTAGAAATAA TCACCAGAAT GAAAACTCTG CAAAGGCAGG ATTTCTGTCC CTTTTTTTTT 001600
001601 TTGTTTTTTT TTTTTTCCTG CCTTATACTT GAGACTTAGT GCATGGCACA TAGAAAGTGC TCCATATGGC CAGGCGCAGT 001680
001681 GACTCACGCC TGTAATCCTT GCACTTTGGG AAGCCAAGGC AGGTGGATCA CTTGAGGTCA GGAGTTTGAG ACCAGCCTGG 001760
001761 CCAACATGGT GAAACCCCGT CTGTACTAAA AATACAAAAC ATTAGCCAGG CATGGTGGCG GGCACCTGTA GTCCCAGCTA 001840
001841 CTCGGGAGGC TGAGGCAGAG AATCACTTGA ACCCAGGAGG CAGAGGTTGT GGTGAGGTGA AGTCACACCA CTGCACTCCA 001920
001921 GCCTGGGTGA CAGAGCGAAA CTCCATTTAA AAAAAAAAGA AAGAAAGTAC TCCATAAATA TTTGTAGGTG GAAAGAATGA 002000
002001 TATTCACATA TGATTTAATC AAAGACTGAC AGTTTATCTA TTTGATAAAA AGACTGTGAG AAGCAGAGAT TGATGGAGAC 002080
002081 AGGAGAGAAA GTGGAGGAGA AGAGAAGATG GAGACAGCAC ACACACATGC ACAGACTTGA ACATGCAGAC ACACATTGCA 002160
002161 CATGCACATG CATGCACACA GCCACACACG TATACACAAA CACACATGCG TGCACACAGC CACACGTATA CACAAACACA 002240
002241 TGCGTGCACA CACCACACAC ATATATGTAA GCACACATGC ATGCACACAG GCATACACAT ATACATAAAC ACGCATGCAC 002320
002321 ACAGCCACAC ACATATACAC ACAAGCATGC ACATACACAG AGGCATATAT ACACATGCAC TAACATACGC ATAGTCACAG 002400
002401 ATACACCTGT AGGTGCAAAC ACCTATATAT GTGTTCACAT TCATACACGG GAGTTATTAT ATTTGTGCTC ACACATGTAG 002480
002481 AGGGTAGAAT TGTGGTTATT AGATGCTGGG AAGAGTAGAG GAAGAGAAGA TAGGGAGAGG CTGGTTGGTG GATACAAAGT 002560
002561 TACAGCTGAA TGAGAGATAA TTTTGACTGT TCTGTATACT GTAGGATGAA TATGGTTAAC AATAACTTAG TGTATATTTT 002640
002641 CAAAAAGCCA GAAGAGAGGA TCTTGAATGT TCACAGCACA AATAAATGAT AAATGTTTGA GGTGATGGAT ATGCTACTCT 002720
002721 GATTTGATCA TTACACATTG TATAAATGTA TTGAAAAATC ACTCTGTATC CCATAAATAT GTATAATTAT TATGCATCAA 002800
002801 CTAAAAATTA AAGACCACAC ATATATGCAC ACATAGACAT GCACATGAAC ACACATACTC ATGCATATGT GTATACATGC 002880
002881 AGAGTTACAC ATATACACAA ACACACATAT ATGCACACAT AGACATGCAC ATGAACACAC AGACATACTC ATGCATATGC 002960
002961 GTATACATGC ACAGTTACAC ATACACACAC ATGCACACAT AGACATGCAC ATGAACACAC AGACATACAC ATGCATATGC 003040
003041 GTATACATGC AGTTACACAT ATACACAAAC ACACATATAT GCACACATAG ACATGCACAT GAAGACACTA TGCACATGTC 003120
003121 CACACATGCA CACAGCCACA CACATACATA TATACACAAA TACCCATAAA TATGCACATG TAGACAGCAT GCACACAGAG 003200
003201 ATACATATGC ACACACACAG CCACATGTAT ACACACTTGT GCAAATGTAT GCACACACAG ACACACATAT GCCCATACAT 003280
003281 AGGCATATAC ACGTACAGAT TCAGATATAA ACACATACAA ACACTCATGT ACATATGCAA ACACATGTAC ACACACAGTC 003360
003361 TGCTGGCATA GTGATGGCTA AACCAATGCA GGGTAGGGTA AAATGTCTCT GGTGCAAGGT CAGTAGGATA AAATCTGCAG 003440
003441 GATCAAATGG AATGCTTAAC AACACTCCTC TGTGGGGTAT CAGTGTCTCC ATTTTACAAC CAGTGCTTAA TCAAATGCAC 003520
003521 ATTGAGTTGA ACTGAATATT GGAAAATGAA TTGCTACCTT TGAATGAATC TACTGAAAAA TTATACTTGT CCTGGGTCAG 003600
003601 ACCGTGTGAA AAGCACTGGG TATTGGAGAT GAAAAGTGGT TGGCCCTTTT TCTTTGAAAG CTTAGTCCAG TGGGGAAGAT 003680
003681 GGATGTGGAA GCTGAGCAAT TAAAATGCAG CTTGATAAAA GCTGTGCTGA AAAACCCTCA CTGAGCTGAG CAGTGGGGGC 003760
003761 TGGGAGGGAG CAGGTCTTAA ACTGAATGAT CAGGTTTAGT GGGAGCTGTT TAAATTCTGA GCCATCAGGC ATTTTTGCTG 003840
003841 GATTCCTTTC GGTGCGCTTG TTAATCAATT ATAAAATAAT AATAATGAAC ACTTCAGGAG AGAGGATGGA GGTTGAAAGA 003920
003921 CAGTGGAGGG CTGGACTTGA GGTTGGAAGA TTTGCAGAGA CCTGGATTGT GCATTCGACC TTTACAAATT GAAGCGAGAG 004000
004001 GCTTTGCATC TCTGAACATC AGGATTCCAC TCTATAAAAA GGAGAATGAA AGCATTCAGT TTATAGGTTT GCTGTGAGGG 004080
004081 CTCAACGAGA ATGTGGATCC AAAAAAGCTT TGGAAACCAA AATACCGCTA GTTAGCTTGC TGCTTTATTA TCCAAAAGAG 004160
004161 GCTGCAAAGA TTTGAGGTTT GTTTGTAGTT TGTTTGTAGA TTAGTCAGTG TCTACTAAAA TAACACTGTG TAACAACCAT 004240
004241 GCCCAAATCT TGGTGGCTTA ATACCTTAAA CGTTATTTTT CTCATTCATG AGGCTGTAGG TGGGTTGGAA TTTGGCAGAT 004320
004321 GTAGGCTGGA ATTAGCTGGA CCTGCCTCCA GGACCAGGGT TGGACCCAAG TCTTCTGTAC GTGTCACCTT CTTTTGGTGC 004400
004401 CAGTGCTACC TGGGATTTTA ATTTCATGGT TTTGCAGAAG CGTAAGAGGG CATGCCAACC ACGTGAACAC TTTTAAAGCC 004480
004481 TAACATCCTA TAGGCCAAAG CCAGCCACAG GTCCAAACTC AACTTCAATA GGCAGGGAAA GTCCTCCACC TACTTTACCA 004560
004561 GGGGAGTACT GCAGAGCAAT GACCGAGGAA GGAAATGTTT AATCCTATTA GGGAGGGAGG GGGGGACCAG GAACACAAAT 004640
004641 CCCTCAAGGC AGGACGAGTA ATGGTTGGCT GCCCAAGGTT GACAGACTGG GTCTCAGTTC CTGGCACTGC TCCTCTCTAG 004720
004721 CCATGAGACT TTAGGCAAGT CAACATTTCA GAGCCTCAGT TTCCTCATCT GTAAAGTGGG TATAATAATA GAATTCTCAC 004800
004801 AGAATTTCAG TGAGGATTGC CTGATTCATG ACAACAGCCT TATAAGTGGT CCCCTTCTTT TACCTCGCAT CTTCTGTAAT 004880
004881 CTCTTCTCTA TGCTTCATCC TTTAAATACA AAAGTCACCC GTAAAGACAG AAAACAGATT AGTGGTGGCC AGAGGTGGTG 004960
004961 GAGGGAGAGA GGGGGAGAAA TGAGAGAAGT GCTAAGGGGT ATGAGGTTTC CTTTTGGGGC GATGAAAATG TTCTAAAATC 005040
005041 GATGTGGTTA TGGTTGTACA ACTGCAAATA TACAATCCCT CTGCCTGGAA CCTTTTCCCC AAGAAATCTG CCCCCACCGT 005120
005121 AAATCCTCAC TTGCATACTG TATAATGAGG CTTTTCTGGA CCACCCTATT TAATTACCCA CTCCTTTCTG TCCATGCCTC 005200
005201 TCTCTCGATA TATTTTCTCT GAATGTTTGT AGCAACTTGA CATATTTTGC ATGCTTATAC ACTATGTACT TTATATTAAA 005280
005281 GCACAGTTAT GTAATTTA
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Predicted Small Protein

Name ENST00000564305.1_smProtein_3092:3370
Length 93
Molecular weight 11181.0537
Aromaticity 0.108695652174
Instability index 76.75
Isoelectric point 8.95928955078
Runs 12
Runs residual 0.00477009696591
Runs probability 0.0395027380322
Amino acid sequence MHMKTLCTCPHMHTATHIHIYTNTHKYAHVDSMHTEIHMHTHSHMYTHLCKCMHTQTHIC
PYIGIYTYRFRYKHIQTLMYICKHMYTHSLLA
Secondary structure LLLLLLLLLLLLLLLLEEEEELLLLLEEEELLLLHHHHHHHHHHHHHHHHHHHLLLLEEL
LEEEEEEEEEHHHHHHHHHHHHHHHHHHHLLL
PRMN -
PiMo -