ENST00000566225.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000566225.1

Source

Gencode19

Same with

lnc-PIEZO2-5:1

Classification

intergenic

Length

2908 nt

Genomic location

chr18-:10411605..10414512

Exon number

1

Exons

10411605..10414512

Genome context

Sequence
000001 GGGCGAGTAC CAGCAGAAGC CGCCTGGACA GCAACCGGAA GTGCGGTGGC TCTGGTGGGC GTGGTGGCTG AGTACCAGCA 000080
000081 GAAGCCGCGT GGACAGCAAC CGGAAGTGCC GTGGCTCTGG ACTCTGGGCT GTCGTAGCCA AACACGCCTT CTTGGCCGAG 000160
000161 TGGTGGCATT CTGCCTGCCC CCTGTGGGCA TCATTGAGAT TCTGCTCCCC AGCTTCCGCA GTGCTCCGTT TTGTGATGGA 000240
000241 AAGTCAGCAT CCCTTGCCTT AGGAGAAACC CAGGTATCTG GTGATGGAAG AACTTTTGAG GGAAGCTTGA GACTGGCCAG 000320
000321 TCCACACTCT GCTTAACCAA GGGAAGGGCA CCACTTCTAC CACCAGGAGA TACCTGCTGT GGGACACAGT GCTGCTCCAG 000400
000401 CCATGCAGAA GCTCACACAG GCCTGCAGCA GTTATTCATC CGTGCACAGC TGCCACTGGC CAGCAGAGCC TGTGACGGGG 000480
000481 CCTTCACAGG TAATTCCCAA GATCAAAACA GCCTCTTGTA CTTAAAATAA TTGCTTTGCC ACCATTTCCA AGATGCTGCA 000560
000561 GAGTGCTTCT GAATTCTGTT CATTTCAAAG AACCCACTTC CTCTATTTGA AAAACGGGTA TTTTAATGTC TGCCAGGCCA 000640
000641 CAATTCCATG AGGCATGATG GTGTGCAGAA TGTTCTGGAG ATTTCCATAA GAAAGATCTC TAAGGGCCAG AACTGACTAA 000720
000721 AGTCATGTAG GCCACCTCTA AAAGAGGCAA GGCTCAAAGA TAAATACTAG CATCAAAAGA GAGGTCCTTT GGTGTGATAT 000800
000801 GCCCCATGTC ATTCAGCTTT GTTGTGGCCA GTCATCGTTG GTGGCAGCTG ACTGGTGGCA GAATCACACC CACTGTGTGA 000880
000881 TTCTCTGCAG AAGGCTGGTG ATTTGAGGAT GGACAGGAAG TTCTGAACTC AGGAATACCA TGCATTTTCA CAAGCGTTTT 000960
000961 CACTTTGCCT TAAGATTTGT AGAAGAGTTA AGTTGGGATC CCATCATCAG CAAAACCTAA CACCACCATC CTGAGATAAG 001040
001041 CTAAGAAAAG CTAAGAAAAA GATAAGCTGA GAAAAGCTAA GGAAAGATTT GTCAACCTTT CTTCTAGATC AGAACAGCAA 001120
001121 ACGTGATGCA GGATTTCCTG AGGTTGGGAC CGGACCGAAA CGTTTTCCAT CTTCTATTTT TGTTTACTCA GCTTCAACTG 001200
001201 CCACCTTTTA TGCTATCCTG GGGGCAAGGG GGCACCCATG TGAATGAGAG ATACTGGATT TGGCCAAGAT CATTAGGCAA 001280
001281 GGGTGCCGTT CCCACACAGT AATGCCTTGC AGGCACAAGG ATGGAAAATT ATGCCAGGAA TGCGATACCG CCAAGCCTGA 001360
001361 ACACAGAGAG GACACGACGT TGGCACAGGC CTGTTGGGTC TTGACTTCAG CCTGCAGAGG AGCTGGAGGA GGCTGGCAGA 001440
001441 CTCTGCTCAC AAATGGGAAG GCCCAGCTGC CAATGGCTTT TCCTCTCTGC CCATGTAACA CTTTTTGTGG GGAATGTGTG 001520
001521 GACACAGCTT GAGGCTTTGT ATCCACCCTG TCAGTTGGTG AGATAGAGAA GAGATGGGCT GATGGTTATT GAGGCACTAC 001600
001601 TGCTCAGATG GGGCATTGTT GGAGCCCATA GATGGGGCAT TGTTGGAGTT GTAATGAGAG AAGTTGCTAG TGGCCCCTGG 001680
001681 AGCAAGACAC CTGGAGCTTC TATTCAGCTT GCTCTTCTTC AACATCCATG CTTCTGTAAG ATGAGATTTG CACGGTGCTT 001760
001761 TTATTTATAT ATTTTATTAT TATTATTTTG AGATAAGGTC TTGCTCTGTC ACCCAAGCTA GAGTGCAGTG GCATAACCAT 001840
001841 CGCTCACTGC AGCATTGACC TCCCTGGCCC AAGCAATCCT CCCAACTCAG CCCCCTGAGT AGCTGGGACT ACAGGCACAC 001920
001921 ACCATCATGC CCAGCTAATT TTTAAATTTT TGTAGAGTTG GGATCTCACT CTGCTGCCCA GGCTGGCCTT AAACTCCTGG 002000
002001 ACTGAAGTGA TCCTCTTGCC TCAGCCTCCC AAAGTGCTAG GATTACAGTC ATGAGCCAGC ATGCCCACCC ACATCATCCT 002080
002081 TTTAGAGTGA CAAATTCGGG CTGGCTCGGT GGCTCATGCC TGTAATCCCA GCATTTTGGG AGGCCGAGGC AGGTGGATCA 002160
002161 CCTGAGGTCA GGAGTTCAAG ACCAGCCTGG CCAACATGGT GAAACCCTGT TTCTGATAAA AATACAAAAA TTAGCTGGAT 002240
002241 GTGGTGGTGG GCATCTGTAA TCCCAGCTAC TTGGGAGGCT GAGGCAGGAG AATCACTTGA ACCCAGGAGG CAAAAGTTGC 002320
002321 AGTGAGCCAA GATCGTGCCA CTGTACTCCA ACCTGGGCAA CAGAGGGAGA CTCTGTCTCA AAAGAATAAA AAATAAAAAA 002400
002401 AAGTTAAGAA GGACAAATTC AAATAGGTCT AGGGGAGAGG CAGAAAAGCT GCTTTATGTT AGGACCTGGC TTGTATGAGA 002480
002481 GGGAACAATA ACTGCAAATG TGGAAAACTG GTAGGGAGAA AGGGGATGAG ACTGATTTTG TATCACTCTA AATGGTAACT 002560
002561 ACGCTGACAA ATGGAAATAT CGAAGGAAAG TTTCCACTCA ATAGAAATGA AGTGTTTTCC AATAATTAGA ATGGTGGAAA 002640
002641 AAAAAAAGTG GCTCCAGGTG AGAACACCCA GAGTTCAAAT TCCAGGTTTG TGACTGACCA CCTCTGTGAC CACAGGCACA 002720
002721 TTAGACAATG ACTCTGAGCA TGTTTTCTCA TCTGCAAAAC ACATATGTTT TTGACGATTT CTTATTGATC ACCAACTACA 002800
002801 TGCCATGTTC TAGAGACCAT GTTCCACCCA AGAGTTGGAA AAAAAGGGGT AAATAAGTCC TGCAGTTTGC CTTCTAGGTG 002880
002881 GGAAGAAAGA ATAAAGAATG AAGTGAAA
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Predicted Small Protein

Name ENST00000566225.1_smProtein_1301:1531
Length 77
Molecular weight 8188.3453
Aromaticity 0.0526315789474
Instability index 45.5302631579
Isoelectric point 6.01995849609
Runs 7
Runs residual 0.0493042952208
Runs probability 0.0394806571278
Amino acid sequence MPCRHKDGKLCQECDTAKPEHREDTTLAQACWVLTSACRGAGGGWQTLLTNGKAQLPMAF
PLCPCNTFCGECVDTA
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLHHHHHLLLLLLLLLLL
LLLLLLLLLLEELLLL
PRMN -
PiMo -