ENST00000566570.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000566570.1

Source

Gencode19

Same with

lnc-SUMF2-2:1,NONHSAT120760

Classification

intergenic

Length

4162 nt

Genomic location

chr7+:56560817..56564978

Exon number

1

Exons

56560817..56564978

Genome context

Sequence
000001 GGGGTCTCTA GTAACCCACC TGGTCTGACA CTGAGGAAAC ACCTACAGGC TGCTGATCCC ACAGTGAGGG GTGTGTGCCA 000080
000081 CCTGGGGTAT GGGCGCTCGT GAATGAGGGT CCCTGCTGAT CCCACAGTGA GGGGTGTTTC CTGCCTGGGG TATGGGAACT 000160
000161 TGTGAGTGGG GACCCCTGCT GCACTCTGTC CCTGTTGGTG CTCGCAGCTA TGGGTGTGGG CTGGCACAGA CAGGACCGAG 000240
000241 CCCTCCAGGG GCTTCCAGGG TTCTTGTAGG GCAGGAGGGG AAGGGTGTGG TGGGGGGCTT GGAGGGGTCT TGCCCTCATC 000320
000321 CCCTGCCCTG TTACTGGGGT GAGTCCAGCA CCTGCCCTGG GGCCCAGCTG GCCTGTTTTT AGAAGCTTCT TAGAGAAGGA 000400
000401 AGAGGAGAAG GAGAAGGAAG GCCTGGGGAG CAGGGATGGA GGGTCCTGGG CACTCCCCAC TATTTACTGT CTTAGATGGT 000480
000481 GACTCAGGAG GGGACCTGGT GCTAGAGACC ACCTTGGGGT CAGTGGTCAT AGTGCATCTT TCTGAGCTCA GCCATGGAGG 000560
000561 CCTCAAAGTG CTTCACAATC ACATCATCGT CCATAGCCCA GGTATGGGAC AGTGCATCTT AGGAAAGCTC CCACAGGACA 000640
000641 AACAGGAGAG CTTCAGGAGA GGGTCTAGGT TTGGGGCTGG GCATCAGGCC AGGAGGGGTC TCCTGGGAGG GGTCTGTGAC 000720
000721 TTCACCTTAT TTCCGCCATG GGCACCTCAC ACTAGGCAGT GCTGGGTCCT TTCTAGATAC CCCTGGGGTC CAGCTCTGCA 000800
000801 CAGGAGGCCA CTAATGGGGG AAGTTCCAGT CAGGGAAGAG CTTGCCACAC TCCTGCCTTT CATCTGAGTT GTGTCAGGGG 000880
000881 TAGGTTCGGT TTCCAGGAGG ACTCATGGTG CCCTGTCCAG TCCACCAGGC CTGGCTTGGT TTGGCCGTCC CTCTGGGTTA 000960
000961 AAGCAGAGGG TCCTGTGGAC AGTGTGAGCA CTGCCTTCGG GCCAGGTTTG GTGTGCTTGT GTGCTTCCCC AGCACCCTTG 001040
001041 GGCACATGGG GACAGGGTTC TGTGCACTTT CAATGCCGCA TGTGCCCTGG CTATGAGCAT GCACTTGCCC TGCAGAAGGC 001120
001121 AGATGTACCA GAGCCTGAGG ATGAGCTTGT GATGAGCTTG ACGTAGGGGT TTGTGGGAAC AGCAGGCATG GGAGGACCTG 001200
001201 GCCCTTCACG GTGGAGGGCT GGTGGCCTGA GCAGGGCCTA CTGGGGCCTC AGTCTGTGGT GCTGGGGGCC CCCTCTGCAT 001280
001281 GGGATGAGAC CTCCCCCAGG AGGCTGGATC AGATAAGGTC CTGCAGCTCC TTATGGGGGT GTTCTCATAT CCATCAAATG 001360
001361 TGACCCCTGA AAGAGGGGGC TCCCTGAGTG CTCTCCCAAG ATGAGTCCTG GCCCAGTCTG CCCAGGATGC TGGCCCTGAG 001440
001441 TCCCAGCCCC AGCCGTGTGA TGCCCCCTCT CAGGCAGGGC ATGGTTTGTG TGCCCTGCAG GGATCTGCCT CTGCCTCCTG 001520
001521 TGCAGAGGAG GGGAGCTGGG TCCTTCTGGA GGAGCCAGAC TCCTGGGCAG GGTCCCTGGA CTGGGTCTCC TGTGCACACT 001600
001601 TGTCCCATCA AGCAAGCACT GTAGGAGTCA GTTTAAGGTG GCAATCTGGG TGCACAACAT TTGCTTGTCT TCAAGGAAGG 001680
001681 AGCAGAGGTG TTCAGAATCC CCTGGACTGC CCTGAAAACC TCACTCTTCC AGGCCCCTCT GCAGACCCTT CCCAAGGCCA 001760
001761 GATCTCTAGG CAGTAGGCTG GGCTGTCACC CTCTTCTCTG AGACCCTACC CCTGTCCTGA GACCTCCCCA CTGCCCCTCA 001840
001841 GATGCCCCAT CCCTGCGGAT TGCCCACCTC CCCTGGCACC CTCCATGCCC CACACGCCTT ACTTGATGCT GCAGCGCTCT 001920
001921 CTGAACATGG CATGGCTTGT GAAGGTGTGG CTCACATCTA GGTCATTCTG GTGCATGTTC AGAGGACATC TTGGCCTGCT 002000
002001 CCATTTTCTA TAGAGCAGGG CCAAGCCTCA GAACAGACAC AAGAGTCACT GTCAAAACTG CTGTCATAAA ACAGACATTC 002080
002081 TGGAAGGGAA GGAGTCTTTT TCTGCAGATA CTTCATTTCC AAAGCCAGGA AAGTCATCAG CACACAGCTC ACCTGTGTTG 002160
002161 CCCATGCCAC TGTCTGCCCA GGATGTGTGA CTGACCCCTT CCGCCCCTTT GGGGTTGACT TTCCCTCCAT CTGGGTAGCT 002240
002241 GGGCTTCTGA CACAGTCTGG CCTATGCATC CTGCTCTAGC TGGGAGTGGA AGGGCCAGAC CTGGTGTTTC CCTGGGTTCT 002320
002321 TGGCCTTTGT CTTCTCGACA TTCAGTAGGA GTGACCGTGC TGGGCCCCAG ACCTCTGTGA GGATTCCTTT TTAGACCCAA 002400
002401 TGAGACATTT GTGGACAGAA GATGCTCTGG TGAGACAGAC CTTAGGGTGA CTCTAAAGGG GATCTGAGCC TAAGGATTCT 002480
002481 GGAAGTTTCC AGTCTTTGGC TCCACAGTTC CTCAGGAGAG GTTCAGTCTG CCTAGGACTG GGCCTCCCTT TTCACGAAGA 002560
002561 GTGGGCAAGA GCTCAGGTTG TGAACTCTGA TCTGGATTTA TTCCTTCCTA TGGGATGTCC AGAAGGTGTT CCTGTTCCTG 002640
002641 GCTTAGAAGC AGACCATGCC AAGGCATCAG ATTCCTCCCA GCAAGGTGAT GCTTGCAGGG ATGGGCAGGA GGGCTAGGGA 002720
002721 CCAGGCCTGT TGTCCTTTCA GTGAGGAAAG TGTGTCCTGC CCTGTCTGAG AGGCAGGCAG CACCAGGAGG CAAAAATGGG 002800
002801 CTCCTGTCCT AAACCCTGAA GAGCAGTCAT GGGGGACCCT CACTCACAGC TGTGCCTTCT TGCTGTTCCT AGATTTATTC 002880
002881 CAGTTAAGCA TTTATAGGCA TTTATCTGTG TGTCTGATGC CCTGACGTTT TTGCTGTAGG TAAGAAGTGA TGGAGTGAGC 002960
002961 TGAGCTGCCA GGCTTCCTGG AGTGATTCTT GGATGCTGGG TCACGTGGTT AGGGGCCCTG ATGGGACTGA ACTGGAAGGA 003040
003041 ACCAGAATAG GACAGAACCA AGCCCCTGAT TAGTGGGCAC TGGTGGCCTG GCCTCATGAC CACAGGACAC ACTGTTCCCA 003120
003121 GGGCACAGAC ACCCTGGGCT TTGGTTGGGT CTTGGCCTCC AGGTAGGGCC CTGTTGGGCA GCGGGCAGCA ACTCCTGAGA 003200
003201 CACTACTGTG ATTCTTGGTG GTGGCTGTGG TAAAAAACCT GCAGGGCTAG AGTTTGGGGT GAGATTCAGC AGTAACTGTG 003280
003281 GCCTCTCCTA GTGACAGTAT GTCACTCCCA CTCCCAGCAC GCATGCCCAC AGGCCACGGC CTCCACATCA CAAACCCCCC 003360
003361 ACCAAGTTGC CCATCTATGG AGCAGCTCCC ATACGGCAGG GTCAGGCTCT TACCTCCACC TCCAGGGCAC AGACAGGGGG 003440
003441 AGCTCTGTCT CACTGTAAGG CAATGAGGAG AGTTGAGGGC CCAGACCAGG CTAGGGGCCA TCCCCTTTCC CGAGCAGGCC 003520
003521 TCAGGGAAGG ACCAGCCCCA TTCCCATCTG ACCTAGGTCT TAGCCCAGGA GCCTGCATAG GGAAGAAAGG ACAGACAGGG 003600
003601 CCTCCTTACT GGCTGACACT CAGGAGGGGC TGGGGCAAGA GAGCAGAGGG AGCGCAGGGC CAGGCAGGGG CTGCTGAGGA 003680
003681 TCCATGGGAG CTCAGGGTGC ACAAGGGGGC TGCCCTTCCT GGGCTGCAGG CAGCATCCCC TATGGGAGCT GAGAAAGTCC 003760
003761 AATCCTGAGA TGGGACAGTG CTGCCCAGGG GTGTGTGGCT GGGCCCTGAC AACAGTCTCC CCAAAAGTGA CCACATCACC 003840
003841 AGGCTCAGTT CCAGGAAGGC TGAGAAGTGC CCAGTACACT GAGGATGCAC CTCAGTTACA TAAAATAAAT GAAACTGGAG 003920
003921 TACTAACGTA CAGTTTAAAG GTTATAGTTA CTATTTTTAT ATGATATACT AGTAATTTTT GAATAGGGTA AACTTTAGGT 004000
004001 GTTTTGACAC CAAAAGAAAA CTACATGAGT TCATGCATGT GTTAAATTGC TTTACTGTAG TAATCATTTA CATGTATATG 004080
004081 TATATATGAA TATAATTATG GGCTCATTAA ATTTAAATAT TATAAATAGG TGACAAAGAA TAAAGTTAAC TGGAAAACTG 004160
004161 TG
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Predicted Small Protein

Name ENST00000566570.1_smProtein_3095:3232
Length 46
Molecular weight 5204.9036
Aromaticity 0.155555555556
Instability index 45.7622222222
Isoelectric point 9.49346923828
Runs 7
Runs residual 0.00669191919192
Runs probability 0.0112044817927
Amino acid sequence MTTGHTVPRAQTPWALVGSWPPGRALLGSGQQLLRHYCDSWWWLW
Secondary structure LLLLLLLLLLLLLLLLLLLLLLHHHLLLLHHHHHHHHHHLLEEEL
PRMN -
PiMo -