ENST00000567534.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000567534.1 |
Source |
Gencode19 |
Same with |
lnc-RP11-327F22.5.1-2:3,NONHSAT142451 |
Classification |
intergenic |
Length |
1171 nt |
Genomic location |
chr16+:50918120..50934962 |
Exon number |
4 |
Exons |
50918120..50918233,50918393..50918658,50927572..50927773,50934374..50934962 |
Genome context |
|
Sequence |
000001 CAGTGCCCAC TTTGTTCATC TCTGCTCACT GGGGGAGCCA GGACACGGAT CCAGGTTTTC TGACTCCAGG TCTCAGGCTT 000080
000081 GCTCCATAGC GCCACCTGCT GGTGACGGCA ATCGGTAGGC ACCCAAATCA AGACTCAGAT TTCCTCATCT CAGAAGTTGT 000160 000161 CCACTTCTTC TCCGACCTCC ACGGTAACTC GGAACCACAC CGTGGAGTTA TCCCTGTGTC CTCTTTCTCG GAAGTTCCAC 000240 000241 ATCCAACCCC TCAGCAGGTC TCAGCGGCAC TCTCACCACC TCCTCTGCTC TGTTCCTGTT TCTCTTGGAT GGTCGAATGT 000320 000321 TTCCTAAGGA GTGTCTGCTG CTTCACGCTT GCCCCCTGGA GTGGCATCTA AAAGGTGCAG GATACCCTAC AACTAACAGG 000400 000401 CATGATGCCA TCAAGACATC TTGAGCCTGG CTACCTCCCG TGGCCTGTAT TTTGTCCACA GGAAACTCGC GCAGTCTCAC 000480 000481 TACAGCAAAT TGAGGTGGTA TGGGGTGCCT GCTGCTGCCT CTCTCTTCAC CTTTCCACAG AGGGCTGCCC CAGCCTGACT 000560 000561 CCCACTTCCA GAGTTTCTCC AGCCAGGAGA ATCCTGAAAT CTCTGTAAAT AAGCAATCCA GGAGCCAGAG AATCATGGGA 000640 000641 TCTCATATAA ACAAATCATC AAGGAAAAAC ACAGCCAGAG TCTCCATTTG GTAAACCTCC GTGACTGGGG ATCCCCGGCC 000720 000721 ACCCAGAAAG CAGTATTGCC TGCCATGCAT GTCATCACTG ATTTTTACTG CTGCAGCAGA CTCCGTCAGA CCTGCCTGCT 000800 000801 GCTTCAGCGA ATTGTTCAGT GCACACCACC AGCTACCTGC TGTAAGCATT CACACTCCTC TACCTGCCTG GCAGCATTTC 000880 000881 TCAGCTGAAC ACAGGCCAGG CCAGAAGTGC CAGGGATTTA ATGCCCTTAG AAGTAGCTCT CTACCAATGA CAAATGGAGC 000960 000961 TGGTGGATAC ATTCTCAGCT TCCTCCCCTC TCAGGTGGAA CAGCCCTGAG ATGTGCTCTA TGCAATCTCC CACAAGTCCC 001040 001041 CAGCAGGCTC AAGCTCCCAT TGTCCAACCC TGGTAACCTG CTCATTGACA CCCCTGTCTT GCCTTCCCTT CCTGGCCTCA 001120 001121 CTTTCTCACT CTCTTACTGT TGCCTCCTGA GATCGCATCC AAAATAAATG A |
Predicted Small Protein
Name | ENST00000567534.1_smProtein_401:607 |
Length | 69 |
Molecular weight | 7565.8434 |
Aromaticity | 0.0588235294118 |
Instability index | 90.95 |
Isoelectric point | 8.39630126953 |
Runs | 10 |
Runs residual | 0.00655802861685 |
Runs probability | 0.0202967673556 |
Amino acid sequence | MMPSRHLEPGYLPWPVFCPQETRAVSLQQIEVVWGACCCLSLHLSTEGCPSLTPTSRVSP ARRILKSL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEELHHHEEEEELLEEEELLLLLLLLLLLLLLLLLLLH HHHHHHHL |
PRMN | - |
PiMo | - |