ENST00000568986.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000568986.1 |
Source |
Gencode19 |
Same with |
lnc-AP002478.1-5:3 |
Classification |
intergenic |
Length |
522 nt |
Genomic location |
chr18+:4264633..4280982 |
Exon number |
2 |
Exons |
4264633..4264901,4280730..4280982 |
Genome context |
|
Sequence |
000001 ACTTGCTCTT TTTTCCTCCC ATTTTAGCAG CCAAGGATGG GAATTACACA GCGAAATGCA GGCTAATCAG CTAAATCTAG 000080
000081 ATTAAATATG CTAGTCCTTG GGGACCTTGA GCTGAATTAA TGGAAACCGA GGTTTTTAAT GTTCCAGACT AATTTTGGAA 000160 000161 GCTCACTTCC AGCAGAGGCA AACTTGAGGC TGTCCAAAGG GAGCAGATGG CAAGGCTTTC TCCAGGTGCA CCAACCTTTG 000240 000241 AAACAGCCCT CGGCAAAACC ATGAGGAAGG GAGGAGGCTC CATGATCTTA CCTTCCCAAT TATGAAGTAA GCAACGATGA 000320 000321 CCTCTTAAAC TCGTGAATCT AACAGTGGTT GGGCATAGAT AATTGCTGTG AAATACTTGA TGACTGATTA GCTTTGATAA 000400 000401 AGAATTCTGA GATAATTTTT ATGCTGTTGT TACTAATCCC ACCCTCAGCA TTCTTTCAAA AATGAGATTA TTTGTCTTTT 000480 000481 TCTTCATGGC CTTGGTGGAA ATATAAATTT CTTTTTAACC CT |
Predicted Small Protein
Name | ENST00000568986.1_smProtein_206:304 |
Length | 33 |
Molecular weight | 3304.9037 |
Aromaticity | 0.03125 |
Instability index | 58.621875 |
Isoelectric point | 11.0001831055 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0435082140965 |
Amino acid sequence | MARLSPGAPTFETALGKTMRKGGGSMILPSQL |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHLLLLEEELLLL |
PRMN | - |
PiMo | - |