ENST00000569932.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000569932.1

Source

Gencode19

Same with

lnc-ZNF639-1:1,NONHSAT093391

Classification

intergenic

Length

1566 nt

Genomic location

chr3+:179058110..179059675

Exon number

1

Exons

179058110..179059675

Genome context

Sequence
000001 GCTGGAATTT GCTTTGTACT AGTGATTTGA AAAATAATTT TCTGGATAAC GAATTTCCAT ACTAAAGCAT CAGTCACCAC 000080
000081 CAATTCCTTA TTAAGTTAAT TCTCCTTAGT AACTTTGGTG TTAAAGTGGT AACTATCTGA ACCCAAAATA AATTTGTGAA 000160
000161 GAGTAATTTA TTCATTCTAA AAAGAAATTT TCTTACATTG CTAGAAAAGA ATAGTATCTA CTAATCTTAT TCCCATACTT 000240
000241 TATGAAGGGT GATTATTTAG AGAGTTTTAA AAGAAATTAA CAGAACATTT AAAAGTGTGT TCTTTGTTGT TTGTTTTTAA 000320
000321 ATAGGCAAAT GAATCTAACC TGACATCTTT TTTCCCCTTG CTAGAAATAT TGAGCTGAAT GAATTACATT CCAAAAATGT 000400
000401 AATGAATAGT ACACATTTTG AATGAAAACT CAAAGTTTTC TAGTTTTTAA TATCTTGTCT GGAGAGTGTA TCCACTACTT 000480
000481 GAAAAATACT GCAGTTGAAT TATTGATATT TTCACCTTTA CTCTTCAAAG TAAAGCTGAA ATCAGAAATT GGAATCATAT 000560
000561 TCAGCAAATG TAATTTCTGG TGGGTAATTT TCTTTTTTCT TTTTAAGGCT ATTCACCATG CTCTTCTGAA TTTTGGTTGG 000640
000641 CTAAAATTTG AGAATACAGA ATTCCCACGT TTCCTGCCTA CCCTGTTCAT TCTTGGTTAT GTCCAGAGTG GCATTATTTG 000720
000721 TCTTTTTCTG TTTTTCATTT TCTTTTATAA GAGAGGCCCA GGCAGATCTC AAACTCCTGG GCTCAAGTAA TCCACCTGCC 000800
000801 TCAGCCTCCC AAAGTGCTGG GATTACAGTC ATGAGCCACC ACTCCCGGCC TTATTCATCT TTTTTTAAAT ACATTATTTC 000880
000881 TGAAATTATA TTCTATGGCT GATTACTGTT ATCTTTACAA CTCATCTTAT TTGGGTTTTC AGAAAGTTTC AAAAGATTAA 000960
000961 AGTTTTCCCA ACTAACAAGG TAAGTTGCCA TGAACTAAAC ATGTCCCCCT CAAAATTCAT ATGTTCAAAT CCTAATCCCC 001040
001041 AGTGTGATGA TATCAGAAGA TGGGGCCTTT GGTATATGAT TAGGTCAGGA AAGTGGAGCC CTCATGAATG GGATTAGTGC 001120
001121 CGTTAGAAAA GGGATCCCAG AGAGCGCTCA CCTGTTTTCC ATGTGAGGAT ACAATGAGAA GTCAGCAGTC TGCAACCTGG 001200
001201 AAGAGAGCCT CACCAGAACC TAACCATACT GGCACCTTGA TCTCGGACTT CCAGCCTCCA GAACTGTGAG AAATTTCTGT 001280
001281 TGTTTATAAG CCACTCAGTC TATGGTACAT TGTTATAGTA GCCTATATTG ACTAAGATAG AGTAGATTTG TTTTGATTCT 001360
001361 TCCTTCCGTC TGTTCTCCAA ACTCTTAAAA TAAGTTACTC CCTTCATGCC ATATCCCACA TCACTTGCTT GTATACCGTG 001440
001441 TAAATATTTT ATATATACCT GCCTGGCATC AGTTTGTGCT GATTTTGTAA ATTTTGAATG TGTTTGTTTT AGATTTTAAG 001520
001521 CATAACATTA TGGCACATAT CTTAATAACT TTTTATGGTT ACAATA
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Predicted Small Protein

Name ENST00000569932.1_smProtein_698:901
Length 68
Molecular weight 7491.5354
Aromaticity 0.179104477612
Instability index 54.1285074627
Isoelectric point 9.03411865234
Runs 9
Runs residual 0.00898648120653
Runs probability 0.039843765334
Amino acid sequence MSRVALFVFFCFSFSFIREAQADLKLLGSSNPPASASQSAGITVMSHHSRPYSSFFKYII
SEIIFYG
Secondary structure LLEEEEEEEEEELHHHHHHHHHHHHHHLLLLLLLLLLLLLLEEEEELLLLLLHHHHHHHH
HHHHHLL
PRMN -
PiMo -