ENST00000569969.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000569969.1 |
Source |
Gencode19 |
Same with |
lnc-SPNS1-1:1 |
Classification |
sense |
Length |
5296 nt |
Genomic location |
chr16+:28986125..29002096 |
Exon number |
19 |
Exons |
28986125..28986421,28986505..28986713,28986813..28986878,28989229..28989365,28990476..28990627,28990726..28990792,28992791..28993866,28994178..28994243,28994513..28994611,28995107..28995278,28995526..28996838,28997034..28997537,28997703..28997767,28997861..28998035,28998120..28998214,29000848..29000910,29001095..29001160,29001254..29001340,29001510..29002096 |
Genome context |
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Sequence |
000001 GGCTGCCGTG GTGCAGCGCC CGGGCTGAGC GACAGCAAGT GCAGCGGGCT CCTACCCCGG GTGAGGGGTG GCCTCCGCGT 000080
000081 GGGATCGTGC CCTCTTCAGC CCGCTCCTGT CCCCGACATC ACGTGTATTC CGCACGTCCC CTCCGCGCTG TGTGTCTACT 000160 000161 GAGACGGGGA GGCGTGACAG GGCCCGGGTC CCTTCTCAGT GGTGCTCTGT GCTTCAGGGC AAGCTCCCCG TCTCCGGGCG 000240 000241 CACTTCCCTC GCCTGTGTTC GGTCCATCCT CCTTTCTCCA GCCTCCTCCC CTCGCAGCCA GGCGGATGAC CCGGACGACG 000320 000321 GGCCAGTGCC TGGCACCCCG GGGTTGCCAG GGTCCACGGG GAACCCGAAG TCCGAGGAGC CCGAGGTCCC GGACCAGGAG 000400 000401 GGGCTGCAGC GCATCACCGG CCTGTCTCCC GGCCGTTCGG CTCTCATAGT GGCGGTGCTG TGCTACATCA ATCTCCTGAA 000480 000481 CTACATGGAC CGCTTCACCG TGGCTGGCGT CCTTCCCGAC ATCGAGCAGT TCTTCAACAT CGGGGACAGT AGCTCTGGGC 000560 000561 TCATCCAGAC CGTGTTCATC TCCAGTTACA TGGTGTTGGC ACCTGTGTTT GGCTACCTGG GTGACAGGTA CAATCGGAAG 000640 000641 TATCTCATGT GCGGGGGCAT TGCCTTCTGG TCCCTGGTGA CACTGGGGTC ATCCTTCATC CCCGGAGAGC ATTTCTGGCT 000720 000721 GCTCCTCCTG ACCCGGGGCC TGGTGGGGGT CGGGGAGGCC AGTTATTCCA CCATCGCGCC CACTCTCATT GCCGACCTCT 000800 000801 TTGTGGCCGA CCAGCGGAGC CGGATGCTCA GCATCTTCTA CTTTGCCATT CCGGTGGGCA GTGGTCTGGG CTACATTGCA 000880 000881 GGCTCCAAAG TGAAGGATAT GGCTGGAGAC TGGCACTGGG CTCTGAGGGT GACACCGGGT CTAGGAGTGG TGGCCGTTCT 000960 000961 GCTGCTGTTC CTGGTAGTGC GGGAGCCGCC AAGGGGAGCC GTGGAGCGCC ACTCAGATTT GCCACCCCTG AACCCCACCT 001040 001041 CGTGGTGGGC AGATCTGAGG GCTCTGGCAA GAAAGTGAGT TTATTCCCAC CCTAGACCAC CATCTGAGGC CCCCTGGCGT 001120 001121 CTGGTTTGAG GTTTAAGTGG GGATGTTCCT GTTCCTGGCC ACACCCCAAG GCCAGTAATT CGGTCGATAC TGTCCCCTTG 001200 001201 TGGCAGCTGC TTGAATTACA GGCCCAGATC CTGGGAGCCA GAACCACCTC TGCACGGTGT TGTGACCTTA CTAAAATAAG 001280 001281 CCAGGAAGGG AGAAGAGAGG TCCCCTCCTG CCTCGACACC TCCGTGGGGT CTTACTCTCT CCCTCCCAAC TATCTGCAGT 001360 001361 CCTAGTTTCG TCCTGTCTTC CCTGGGCTTC ACTGCTGTGG CCTTTGTCAC GGGCTCCCTG GCTCTGTGGG CTCCGGCATT 001440 001441 CCTGCTGCGT TCCCGCGTGG TCCTTGGGGA GACCCCACCC TGCCTTCCCG GAGACTCCTG CTCTTCCTCT GACAGGTGCC 001520 001521 CAGATGGGGC TATGCTGGGG GGCCTGCGGG TGGCAGGGCT GGAGTGAAGA GCATCTGTGG CTCAGACCCA GGCAGGGAGT 001600 001601 TTGACTCCTG ACTTCACAAG CTGCCTGCTC TCCTGGAATC TCCGTTTCCT GGTCTGGGAA ATAAGTGATG GGATGATGTC 001680 001681 TGCCACTCAG GGCTGTGCCA ACCATGGGGT GCTGTGTCTG TAGGGACCTT GGTTGTGAGG GTGGCTAGGA TGGACAGCGT 001760 001761 AGGGGCCTTG GCAGGCACAG GGACAAACCC CCCATTCCCT TCCCTCACCC CTAGTCTCAT CTTTGGACTC ATCACCTGCC 001840 001841 TGACCGGAGT CCTGGGTGTG GGCCTGGGTG TGGAGATCAG CCGCCGGCTC CGCCACTCCA ACCCCCGGGC TGATCCCCTG 001920 001921 GTCTGTGCCA CTGGCCTCCT GGGCTCTGCA CCCTTCCTCT TCCTGTCCCT TGCCTGCGCC CGTGGTAGCA TCGTGGCCAC 002000 002001 TTATATTTTC ATCTTCATTG GAGAGACCCT CCTGTCCATG AACTGGGCCA TCGTGGCCGA CATTCTGCTG TACGTGGTGA 002080 002081 TCCCTACCCG ACGCTCCACC GCCGAGGCCT TCCAGATCGT GCTGTCCCAC CTGCTGGGTG ATGCTGGGAG CCCCTACCTC 002160 002161 ATTGGCCTGA TCTCTGACCG CCTGCGCCGG AACTGGCCCC CCTCCTTCTT GTCCGAGTTC CGGGCTCTGC AGTTCTCGCT 002240 002241 CATGCTCTGC GCGTTTGTTG GGGCACTGGG CGGCGCAGCC TTCCTGGGCA CCGCCATCTT CATTGAGGCC GACCGCCGGC 002320 002321 GGGCACAGCT GCACGTGCAG GGCCTGCTGC ACGAAGCAGG GTCCACAGAC GACCGGATTG TGGTGCCCCA GCGGGGCCGC 002400 002401 TCCACCCGCG TGCCCGTGGC CAGTGTGCTC ATCTGAGAGG CTGCCGCTCA CCTACCTGCA CATCTGCCAC AGCTGGCCCT 002480 002481 GGGCCCACCC CACGAAGGGC CTGGGCCTAA CCCCTTGGCC TGGCCCAGCT TCCAGAGGGA CCCTGGGCCG TGTGCCAGCT 002560 002561 CCCAGACACT ACCTGGGTAG CTCAGGGGAG GAGGTGGGGG TCCAGGAGGG GGATCCCTCT CCACAGGGGC AGCCCCAAGG 002640 002641 GCTCGGTGCT ATTTGTAACG GAATAAAATT TGTAGCCAGA CCCCAGGTGC CTGCTCTCGT CTTTCTCTGG GTGGCCTCTG 002720 002721 ATCTTGCACC CCGTCTTCAC CCCAGGGCTC CTGAAGACTG TGGGTCATTC CTCAGGGCTC TGGGTGAGTC TCTGCCCTTC 002800 002801 TGGGCTGGGC GACTGAGATG GGGGACTGCT CTTCTCCGAG TGAGCTGGCT GAGTGTGACC GTGAGTCACG CCCCTGCTTC 002880 002881 CCTGGAGCCT GTCCCTTGCC TCACAGGCCT GGCTGAGGTG GGGGTGGGCA CTGCCCTTTG TACCCCAGAA TTCCCACTGT 002960 002961 CAGGGCCTCC CTGCTCGCTG CCTCCCCGGG TCCTGGATAT GGAGGCCACG GCTGCCAGCT GGCAGGTGGC TGTCCCCGTC 003040 003041 TTGGGGGGGG CCAGCAGACC CTTGGTGAGT GCCTGGGGTG GCTCCCGGGC CTCCTCCTGC CCCCTCCCCA CTGGCGGGTG 003120 003121 GGGTGGGAAG GGGGCGGGTG CAGCCGGCTG AGAGCTTGAT GATTTCCTGC CCTCGCCCGG CGCTCACCAC AGCTTCCTGC 003200 003201 CGCAGGCGGG CGGGAGGGCG GGCACGGAGA GGCGGGCGCC GAGGAGGGGC AGGTAGGGCT GGGACGCAGG GGTAACTGGA 003280 003281 TCCCCCGACT TCAGCCCAGG CCCTGGTCTG ACCACCCTGG GAGCAGGGAC TTTCCACAGT CAGCTGGACG CACACTCAGC 003360 003361 CCAGTAAAAG AGGGGACCCA TCCCGGGAGC CCCGGGGAGG GCACAGCTGC CTCCTCCCGG GCTCCCCTGC CACCTGGTGC 003440 003441 CTACCTGCCC CCTGCTCCCT GCCGGGTCCG GTCCTCACCC CATCTTCATC TGGCCTTGAC TCTGCCCTTG AGGGGCCTAG 003520 003521 GGGTGCAGCC AGCCTGCTCC GAGCTCCCCT GCAGATGGAG GAGGCCATCC TGGTCCCCTG CGTGCTGGGG CTCCTGCTGC 003600 003601 TGCCCATCCT GGCCATGTTG ATGGCACTGT GTGTGCACTG CCACAGACTG CCAGGCTCCT ACGACAGCAC ATCCTCAGAT 003680 003681 AGGTGAGTCC GCCCCAGCCG CCCTGGGTCT CCCTCCACAC CCCATGGCGG GGCAGGGCTG GGGCTTCCAT CCTCCATCTT 003760 003761 CCAGCCCCAT CCCCAAGCTG TGTCTCCTTT ACCAGTTTGT ATCCAAGGGG CATCCAGTTC AAACGGCCTC GTGAGTACAA 003840 003841 GGAGGGTCCC CTACCTTGGG TGCCAGGGAG AGGGTCCCCT GGTGTGGGAG TGAGCGTGAA CCTTCAGACT TCCCCTGCCA 003920 003921 CCTTGGGGCT GCCCACATGG CCTTGACCTG AGCTGGGAGA GGGGAGATGG CTCCCCCAGG CCTGTCCAGG GTGTGGGGCT 004000 004001 TTCAGGGGCT TAGTCTGTTC TTTGAGGCCT TGACGATGTC CGGAGTCCTT CTTTCAACTT GGTTCTGTGT CCTCAGACAC 004080 004081 GGTTGCCCCC TGGCCACCTG CCTACCCACC TGTCACCTCC TACCCACCCC TGAGCCAGCC AGACCTGCTC CCCATCCCAA 004160 004161 GATCCCCGCA GCCCCTTGGG GGCTCCCACC GGACGCCATC TTCCCGGCGG GATTCTGATG GTGCCAACAG TGTGGCGAGC 004240 004241 TACGAGAACG AGGGTGCGTC TGGGATCCGA GGTGCCCAGG CTGGGTGGGG AGTCTGGGGT CCGTCCTGGA CTAGGCTGAC 004320 004321 CCCTGTGTCG TTACCCCCAG AACCAGCCTG TGAGGATGCG GATGAGGATG AGGACGACTA TCACAACCCA GGCTACCTGG 004400 004401 TGGTGCTTCC TGACAGCACC CCGGCCACTA GCACTGCTGC CCCATCAGCT CCTGCACTCA GCACCCCTGG CATCCGAGAC 004480 004481 AGTGCCTTCT CCATGGAGTC CATTGATGAT TACGTGAACG TTCCGGAGAG CGGGGAGAGC GCAGAAGCGT CTCTGGATGG 004560 004561 CAGCCGGGAG TATGTGAATG TGTCCCAGGA ACTGCATCCT GGAGCGGCTA AGACTGAGCC TGCCGCCCTG AGTTCCCAGG 004640 004641 AGGCAGAGGA AGTGGAGGAA GAGGGGGCTC CAGATTACGA GAATCTGCAG GAGCTGAACT GAGGGCCTGT GGAGGCCGAG 004720 004721 TCTGTCCTGG AACCAGGCTT GCCTGGGACG GCTGAGCTGG GCAGCTGGAA GTGGCTCTGG GGTCCTCACA TGGCGTCCTG 004800 004801 CCCTTGCTCC AGCCTGACAA CAGCCTGAGA AATCCCCCCG TAACTTATTA TCACTTTGGG GTTCGGCCTG TGTCCCCCGA 004880 004881 ACGCTCTGCA CCTTCTGACG CAGCCTGAGA ATGACCTGCC CTGGCCCCAG CCCTACTCTG TGTAATAGAA TAAAGGCCTG 004960 004961 CGTGTGTCTG TGTTGAGCGT GCGTCTGTGT GTGCCTGTGT GCGAGTCTGA GTCAGAGATT TGGAGATGTC TCTGTGTGTT 005040 005041 TGTGTGTATC TGTGGGTCTC CATCCTCCAT GGGGGCTCAG CCAGGTGCTG TGACACCCCC CTTCTGAATG AAGCCTTCTG 005120 005121 ACCTGGGCTG GCACTGCTGG GGGTGAGGAC ACATTGCCCC ATGAGACAGT CCCAGAACAC GGCAGCTGCT GGCTGTGACA 005200 005201 ATGGTTTCAC CATCCTTAGA CCAAGGGATG GGACCTGATG ACCTGGGAGG ACTCTCTTAG TTCTTACCTT TTGTGGTTCT 005280 005281 CAATAAAACA GAACTT |
Predicted Small Protein
Name | ENST00000569969.1_smProtein_4355:4516 |
Length | 54 |
Molecular weight | 6059.1828 |
Aromaticity | 0.0754716981132 |
Instability index | 41.3377358491 |
Isoelectric point |