ENST00000571302.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000571302.1 |
Source |
Gencode19 |
Same with |
lnc-ADCY9-1:9 |
Classification |
intergenic |
Length |
774 nt |
Genomic location |
chr16-:3981218..3996306 |
Exon number |
3 |
Exons |
3981218..3981722,3993261..3993376,3996154..3996306 |
Genome context |
|
Sequence |
000001 CACATTCCTT CGTGTTCAAG TATACGTGTG GTTGGCTCGA GCACAGAAGC ACAGAGCTGA GCAAAATATT CAGCGCCTTT 000080
000081 TTCAGAGAAC CCTGGCTGGT GCTGGTGGAT GTTCCTGCCC CTTCCTCCAC CATGAACATT TTTAAAAATT AAGGGAGAAA 000160 000161 CAGGAAAACT TTGAAGAATC TTCCAGATTT GCCTAACGCA GATGTGCATG ACCTGACAAG ATAGATGTGC CATTTGGACC 000240 000241 CTTTCAAGAG CAGACAGAAT GGAAGGGAGG CTGGAGTGCA ATGGTGTGAT CTCTGCTCCT GCAACCTGCG CCTCCTGAGT 000320 000321 TCAAGCGATT CTCCTGCCTC AGCCTCCCAA GTTGCTGGGA TTACAGGGGC CCGCCACCAC GCCCAGCTAA TTTTTGTTAT 000400 000401 TTTCAGTAGA GATGGGGTTT CATCATGTTG GCCAGGCTAG TCTTGAACTC CTGACCTCAG GCGATCCGCC CGCCTCGGCC 000480 000481 TCCCAAAGTG CTGGGATTAC AGGTGTGAGC CACTGCACCT GCCCAAGGAC TAAGGTTTTC TATTTCTTAT TGTGTCAGTT 000560 000561 AGGTTGTATT TTTCTGTGAA TCTGTTCATT TCACCAAATT TTCAAGTTTG TTGGCTTAAA GTTTTCGATA ATATACTCTT 000640 000641 ATTTTGTGGT GAAGTCCCTT TTTTATTTCT TGTATTTGTT ATTTGTGCCT TCTTTTCTTT TTTTTTTTTC CTTTTCTTTT 000720 000721 TTATGAGATA GAGTTTCACT CTTGTCGCCC AAGCTGGAGT GCAATGGCGC GATC |
Predicted Small Protein
Name | ENST00000571302.1_smProtein_224:439 |
Length | 72 |
Molecular weight | 7663.5887 |
Aromaticity | 0.0704225352113 |
Instability index | 59.5394366197 |
Isoelectric point | 7.67974853516 |
Runs | 10 |
Runs residual | 0.00770941438102 |
Runs probability | 0.0356739092033 |
Amino acid sequence | MCHLDPFKSRQNGREAGVQWCDLCSCNLRLLSSSDSPASASQVAGITGARHHAQLIFVIF SRDGVSSCWPG |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEELLLLLLEEELLLLLLLLHHHHHHLLLLHHHHEEEEEEE ELLLLLLLLLL |
PRMN | - |
PiMo | - |