ENST00000573071.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000573071.1 |
Source |
Gencode19 |
Same with |
lnc-DEXI-1:2,NONHSAT140532 |
Classification |
antisense |
Length |
491 nt |
Genomic location |
chr16-:10971057..10982495 |
Exon number |
2 |
Exons |
10971057..10971223,10982172..10982495 |
Genome context |
|
Sequence |
000001 TCTTTTTGCC ATCAAAAGTC CTTTTTGGGG TTTATTTTCA TCCCCACTTC ACACTGCATG CAGGATTTGA AAGGCTAAGT 000080
000081 GTAGACACTA AACAGGTGTC TGAAATAACA ATTCACCTCT CTCTCCCCCG AGGGAAATCA GGTGTCGCCA CAATGTTCTA 000160 000161 ACTCAGACTT AAACTATCTG AAGATCAGTG CATGCATCTC TTCTGGGAAC AGCATAACGT TCCATCTCAG CTGGTGGGAG 000240 000241 ATGAATGGAG CTCAGATGGT GAGCTTTGGG GTGAAATTTC CCAACTTTCA GGTTATCCCT ACCTACCAAC GCACTACAAT 000320 000321 CTGGGTAGGA CCCAGCAGGG CGTGGAGCCA GGCAACGCAT TGTGTAGGAA TCCCAGCCAG GCAGCAGCTC CCGGAGTCTG 000400 000401 GCAGCCCCTC CTCGTGCCCT CAGCTTCCCC AAGGATGCCT TCGGATGCCC AGCTCAGAAG CACACAGCCT CATCACTAGC 000480 000481 CTCATCACTA A |
Predicted Small Protein
Name | ENST00000573071.1_smProtein_191:478 |
Length | 96 |
Molecular weight | 10541.5462 |
Aromaticity | 0.0842105263158 |
Instability index | 70.9021052632 |
Isoelectric point | 5.57391357422 |
Runs | 11 |
Runs residual | 0.0132615002072 |
Runs probability | 0.0363010068893 |
Amino acid sequence | MHLFWEQHNVPSQLVGDEWSSDGELWGEISQLSGYPYLPTHYNLGRTQQGVEPGNALCRN PSQAAAPGVWQPLLVPSASPRMPSDAQLRSTQPHH |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLEELL LLLLLLLLLLLEEELLLLLLLLLLHHHHHLLLLLL |
PRMN | - |
PiMo | - |