ENST00000574716.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000574716.1

Source

Gencode19

Same with

lnc-MMD-4:1,NONHSAT054805

Classification

intronic(AS)

Length

1740 nt

Genomic location

chr17-:53348865..53351014

Exon number

2

Exons

53348865..53350460,53350871..53351014

Genome context

Sequence
000001 ACACGAGAGC TGGGGGACTG GGCACCCAGA CAGTGGCTGT TTCCACATTG GCAAAACAGG AGTTGGTAAC CCAGAAGCCA 000080
000081 TGCTGCGGGG TTAACATCAG GGAACCGATT CGTCCCAACC CAGAAGGAAG AGAAAGGTCA GGCTACATAC CCAAAAATAC 000160
000161 CTTTTGCCAC AGGCTTGGGA CTACTATCCT GTGAATGTCA GCAAGCCTGT CCTCTACAGG GATCCGTGGA GAAGATAAAC 000240
000241 TCTACAAGAA ACAGAAAAAT GTCTACCTGT CTCCAGAACC ATGCAGACTC CCTCCCCTTC AGGATCTCCT AGCCCCTGAT 000320
000321 GAATGAACAG CACTTCCAAG ATGCTTGAGA CACCGGGCAC AGCTACTATC AGTCATGGCG CTCCCAACCT GCAGACATTA 000400
000401 TCAGTCTGCT GGACTGGAAA GATACACGAA CTGCACGCCC TTAAGCGGAG CTTCACCTCA TAATATTGGG AAAAGTAAGA 000480
000481 GAATCCTCTG ACCTTCCATA AACCCAGAAT CACCTGCACA GAACTTCCCT CCATCATTAC TCAGATTCCC AGGCCAGCGT 000560
000561 TTTCCTTCCA TACCCAAACC TTCTCACAAG GAAGGTCGGC AGAAACAGAA TACAAACTCC ATATTGCAAA GGTACAATGG 000640
000641 GTTCTCCCCC ACCCCCGCTC CTTTTGTGCC ACCCACTTAT GCCATCCTTT TCCCACACAC AACCACATGG AAGGGTTTTC 000720
000721 ACTTTACTCT GTAACCAGCC TTCATCATAA CCCAGTCTCC GTGCTCAGAA CTAGAAAGAC AGCCTTCTTA ATTCTCAGCG 000800
000801 GAATATGGGC CTAACAGTGG TAGGACACCC CCCAGCTATT CAAAGAAAAA CCACCAGAGG AAATAATTTC AAATCTGGCT 000880
000881 TTACAAGCAT GTAATATAAA AATAACTCTG CCTTTGTCTG CTATAGATGA CTTTCCCTAA AGGGATGGCT GTCCTTAAAG 000960
000961 CAATCGCTCA ATTCTCATGG CAAACAGATT CTTCTTTTTC CAGTACCCAG CACATATTCG TCCCTCCAGG AGAGCACCCC 001040
001041 CACATCCCAC CTCTGACAGT ATCTAAAATG CAAACATTGA AGTCATCAGA ATGACTCCTG TCATCTCTGC TGGCCTAGGA 001120
001121 ACATTCAGGA CACTGCACCT TGGATGACCG AGGAGCCCCT GCAGTTAGCT CTGGCCTCCA AGAACCACTA CTCTTCCCTT 001200
001201 CATTAAGATG TCAGCCCAGA AAGCTTGGTG ATCCCACAAT AGCCACAACA GGTTTTAATG AATCCCTGGA TTGTTTCTTG 001280
001281 AAAGAAAACT GGATTTCTTC AGATATTTGA TTCATTCTTT GATCAGACAG TTAGAGGAAT AGGGATGGGG TGCTCAAGAT 001360
001361 AAGAAAGGGG TTGGGGCAGT CATGGTAAAT AGTATGAGAA TTCACAAAAA TGGGCCAGGT TGTGGTGGCT CACGCCTGTA 001440
001441 ATCCCAGCAC TTTGGGAGGC CGAGGGGGTG CGGATCACTT GAGGTCAAGA GTTTGAGACC AGCCTGGCCA ACATGGTGAA 001520
001521 ACCCCGTCTC TACTAAAAAT ACAAAAATTA GCCGGGCATG GTGGTGAATG CCTGTAATCC CAGCTACTAG AGAGGCTGAA 001600
001601 GCAGGAAAAT AGCTTGGACC CCGGAGGTGG AGGTTGCAGC GAGCCAAGAT TGTGTCACTG CACTCCAGCC TGGGTGATGG 001680
001681 AGCTAGACTC CATCTCAAAA ATAAATAAAC AAATAAGTAA ATAAATAAAT AAATATTCAC
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Predicted Small Protein

Name ENST00000574716.1_smProtein_926:1093
Length 56
Molecular weight 6084.9517
Aromaticity 0.0909090909091
Instability index 54.6709090909
Isoelectric point 8.25018310547
Runs 9
Runs residual 0.0121212121212
Runs probability 0.0442599462208
Amino acid sequence MTFPKGMAVLKAIAQFSWQTDSSFSSTQHIFVPPGEHPHIPPLTVSKMQTLKSSE
Secondary structure LLLLHHHHHHHHHHHHHHHLLLLLLLLEEEEELLLLLLLLLLLLEELEEEEELLL
PRMN -
PiMo -