ENST00000577279.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000577279.1

Source

Gencode19

Same with

lnc-SP6-2:3

Classification

intergenic

Length

374 nt

Genomic location

chr17-:45968641..45973135

Exon number

2

Exons

45968641..45968947,45973069..45973135

Genome context

Sequence
000001 CCCAGGTGTG GCAGGAGCTT TTACCTGCTC TTCGGCAGTA GCCGGCTGCC ACTCAACCCC ATGCCTGGGT TGTCCTCATC 000080
000081 TAATCCGTCA GTACCAGACA GTGAACATCT CTCCCCCAGG ATGCTGAGGG AGGGTCCTGG AGGGAAGGAT GTGGAACTAC 000160
000161 AGCCTCTGCT CTCAAGAAGC TCAGATCTGG GCAGGGAACA TCACATACCA GGGCTGTCTG TCGGGGGGGT GGAGGGCTGG 000240
000241 GGGAGGGATA GCATTAGGGG AAATACCTAA TGTAAATGAC AAGTTGATGG GTGCAGCAAA CCAACATGGC ACATGTATAC 000320
000321 CTATGTAACA AATCTGCATG TTGTGCACGT GTACCCTAGA ACTTAAAGTA TAAT
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Predicted Small Protein

Name ENST00000577279.1_smProtein_305:358
Length 18
Molecular weight 1866.2589
Aromaticity 0.0588235294118
Instability index 58.3470588235
Isoelectric point 8.65679931641
Runs 5
Runs residual 0.00735294117647
Runs probability 0.0103868574457
Amino acid sequence MAHVYLCNKSACCARVP
Secondary structure LLEEEELLLLHHHLLLL
PRMN -
PiMo -