ENST00000577545.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000577545.1 |
Source |
Gencode19 |
Same with |
lnc-ICAM2-1:2,NONHSAT055256 |
Classification |
antisense |
Length |
889 nt |
Genomic location |
chr17-:62073830..62076291 |
Exon number |
2 |
Exons |
62073830..62074619,62076193..62076291 |
Genome context |
|
Sequence |
000001 CCGAGTCCCC CTCCCCCTGA CACCCCTGTC CCGGGGGTGA AGAATGGGTT GGCGGGTTGT GCTGCGGGGA CTCCCAGAGG 000080
000081 ATGTGCGAGG CAGAAGAGGA AAGAGAACAA GCCATTTTGC TCATCATCAA CAAACCTTGA CCAAGGAAGT GTCTGCGTGT 000160 000161 GCAATGTGCC ATCTGAACCC TGGAGGCATA AGCAGTATGG TCACTTGTCC CAGCATTGTT GGGAAGTGAA AATGTATCCA 000240 000241 TGGAAAGAGA GCAGAAAGAT AAGACTACGC CCCGGGGATA ATGAAAAAGA GAGGACTTGA CCGCTGAGGG ATGGAGTTCC 000320 000321 AAGGAAGTCA GTCCTTGATG GGGCCAAGCA GCAGGGGAAG ACGGGCGCTA TCAGGCTGGG GACAGAGCCC AAGCCAAGAC 000400 000401 CCAGGTGTAT GAATGGACAG GACCTGAGAT GACCCGGTGG GTCAAACTGT CTGACTGTAG AAGAGGAGCT GGGCAGAGAG 000480 000481 CAGAGGTCCA GGGACAGGCC AAGGTTTGGA ATGCCAAGGT TTGGAATTTA GGCTTGGCCC TGTGGGTAAT GGAGAGCTAT 000560 000561 CAGTGGGTTT CAAGCAAAAG GGAGATACCA AGTGCTGTGG CCAGCCATGT TTCAGGAAGA TTGTTCTTGT CCACCTTTGT 000640 000641 TTATGTCAAC CACATTTAGA AGTAACAAAT GTCTGATAGG GGGTCAGGTG CGGTGGCTTG TGCCTATAGT GCCAGCTACT 000720 000721 CAGGAGGCTG AGGCAGGAGG ATCGCTCAAG CCCAGGGATT CAAGGATGCT GTGAGCTACG ATCACGTCAC TGCACTCCAG 000800 000801 CCTGGGAAAC AGGGTGAGAC CCAGTTTCTA AAACAAACGA ACAAACAAAT GTCTGATGGG GATGCATCCT CCCAATAGAA 000880 000881 TACTATTCA |
Predicted Small Protein
Name | ENST00000577545.1_smProtein_428:658 |
Length | 77 |
Molecular weight | 8691.9437 |
Aromaticity | 0.118421052632 |
Instability index | 42.0710526316 |
Isoelectric point | 10.2809448242 |
Runs | 13 |
Runs residual | 0.0296430732002 |
Runs probability | 0.0471784001196 |
Amino acid sequence | MTRWVKLSDCRRGAGQRAEVQGQAKVWNAKVWNLGLALWVMESYQWVSSKREIPSAVASH VSGRLFLSTFVYVNHI |
Secondary structure | LLEEEEELLLLLLLLLEEEEHHHHHLHHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHEE LLLEEEEEEEEEEELL |
PRMN | - |
PiMo | - |