ENST00000580121.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000580121.1

Source

Gencode19

Same with

lnc-FBXO47-1:1,NONHSAT053386

Classification

antisense

Length

456 nt

Genomic location

chr17-:37075054..37078022

Exon number

2

Exons

37075054..37075274,37077788..37078022

Genome context

Sequence
000001 CCGCAGGTAA AAATTATACT TTTATTTGAG TCACCAGGAG AAAGATTCAC TTGTGGTTCA AGTCAAATGT TCAGAATCAT 000080
000081 AACAGGCCAG AAAGGTTTGA TCCCGAGCAC AAGCCCACGA GGGAGGGGAC CAAAACAGAC CAAAATGAGA CAACAACCCC 000160
000161 ATATAAAAAG ATGAACTGGC GGCTTCACAC ACTCACACAC ATACACATAC ACACGGATGA AATGTTTGGA CAGAGGCCCA 000240
000241 TGCCCGTTCC ATCCAGAGAG AAAACCAAGA AGTCGATCAA GGGGGAAGCC TGCCAGAGGA GGGAGCCCGC AGAAGTGGCA 000320
000321 GAAGAAGGCT TCAGTTGGCA AAAGAAGCTG GAAGAGGGGT AGGAATCACA AGCTGTCGCA GGTTTTAAAA AACAGAGACA 000400
000401 CTGAAGAATG GACGGGTCAC GCCCAGGACG GATGCGATGC CGTGGAATGT GCTGAA
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Predicted Small Protein

Name ENST00000580121.1_smProtein_170:361
Length 64
Molecular weight 7428.3915
Aromaticity 0.0634920634921
Instability index 70.8253968254
Isoelectric point 7.96820068359
Runs 11
Runs residual 0.0296404275996
Runs probability 0.0377463024522
Amino acid sequence MNWRLHTLTHIHIHTDEMFGQRPMPVPSREKTKKSIKGEACQRREPAEVAEEGFSWQKKL
EEG
Secondary structure LLEEEELLLEEEEELLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLHHHHHHHLLLHHHHH
HLL
PRMN -
PiMo -