ENST00000582583.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000582583.1

Source

Gencode19

Same with

lnc-DHRS7B-5:13,NONHSAT146860

Classification

intergenic

Length

1670 nt

Genomic location

chr17+:20841851..20885670

Exon number

6

Exons

20841851..20841973,20852416..20852754,20859507..20859666,20859947..20860022,20861615..20861715,20884800..20885670

Genome context

Sequence
000001 GTGCGCGCCT GCCTTGAGGC CAGGCCTCAG AGAAGGGTGT CCCAGATGTA GGCAAAGCGT CCTCCATGTG TTCCTGGAGG 000080
000081 ACCGTCCCAA GTCCTTCTCC ATTCTCCCAA CCTCTTGGGC CTGGAAGTCA GACAAGTACC GGTGATTGCC GGTTTCTTGT 000160
000161 CTGATTTTTG CACTTCTCTG GCAAGCTGCC CCCTCTGAAG AGTTGACTAT TTGGGAGTTA CTCACTGATG GTTCAGCCAC 000240
000241 TTCCAGAACC TACCCCAAGA GCAAGACTTG AAACCAACTC GCACCCTCAA AGCTCCGGAA GCCATTCAGT GTTTCCATCT 000320
000321 TGGCTGAGTG AGTTCTTCAC TGAAACTCAA TTTGACTTTG ACAGTCATCT AATGAGAACT CAAAAGTCAT TCTTGGTTCA 000400
000401 GCCACAGTCA AAGAACTTGC AGAGCATTCT CTGACGAGGT CCTCAAGGAC AACTGAGAGA AGGTCCCATT CCAGGTCTTG 000480
000481 CCCAAGTCTT TCTGATTGGT GGGACTTAAA TCACACCCAA AATTCCAGCT GCAGGAGAGC TCTGAGATTT CATCTTTCCA 000560
000561 ACCTCTGTGT GCTACGTGGG GGTTGGAGCA CTTGCTGACA AGCCTTGCAA CCACCATTGA CAGGATGTCC TCCACCTTTT 000640
000641 CAATCTGATT TGCTCTTTGC CATGCAGACC TGTGGATGAA GAGCCAGAGT CCTCCAAGGT GAAGCTGGAC TGAATATTTC 000720
000721 TGTCCATAAG ACTATTAGAA TCCCCCAAAG TGGGATACCA GTGAGGACCT CACCAGCAGC TGCTGTCTCT CCAATGCAGC 000800
000801 TCCACAGGGC CTGTGAGCAG GGCTGGCTAT GAGATCCTGC CCTGAAGAGC AGTACTGGGC TGCTCTGCTA GGCACCTGCA 000880
000881 TGTCCTGCAA AGCCATCTGC AACCATCAGA GCCAGCGCAC CTGTGCAGCC TCCTGCGGTG AGTTCTGGGA CCTGAGCCCA 000960
000961 GGGGACAGTG TGATCACCCC CAACGCCTGT CCCCAGAGCA CCCTCTGGCC CCACAGTCAG GTGGCTGAGG AGAGGATGGC 001040
001041 AGGAGGAGAT GTACAGTGTG GCACCTCTTA TCCCTCCACC TTCCTGCTCT GGCCACACTG CCTCCTTTCA GTGTCGAACA 001120
001121 TGCCATGTTC TTCCCTGCCT CGGGTTCTTT GCACATGTTG TTCCCGCTGC CTGGAATGCA TGCTCTCTAT CATCTTCCCT 001200
001201 CAGCTCCCTC CTACCCAACT TTCAGGTCTC GGCCCAAACA TCGGGGGTCT CCTCTGACCA CACAGTAGTA CTGGGCCCTC 001280
001281 CTTTGTACTG CTAGTGTTAC TTTCTTTTGA AACTTTTAAT TACAGAACTT ACCACACATA TACATAGAGA GGACTGCACA 001360
001361 ATGATGCCCT CCTCATCCAT TACCAGCTTC ACAAATCATT TAAATTCTGC CTTGTACTTT CCCAACCAGT TGTTTTGGCT 001440
001441 TGTGTATTTT AAAGCAAAGC CAAGACCTCA TATCATTTTA CCTGCAGATA CTGGGCCATA AAGATCTGTA AAACATAACC 001520
001521 CAAATATCCT ATCACTGCCA GCAATAATTT ATTAACATCA TCTAATATTC AGGCCATATC CAATTTTCCC TGATTGTCTT 001600
001601 GAAAACTATC CATTGCTTGC TGTTCTTTTT CATAATCTGT CTTTTTCCTT GATAGAACTT ACCACAATTT
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Predicted Small Protein

Name ENST00000582583.1_smProtein_227:433
Length 69
Molecular weight 7831.6792
Aromaticity 0.102941176471
Instability index 69.5661764706
Isoelectric point 6.23724365234
Runs 11
Runs residual 0.0212639109698
Runs probability 0.0281029692794
Amino acid sequence MVQPLPEPTPRARLETNSHPQSSGSHSVFPSWLSEFFTETQFDFDSHLMRTQKSFLVQPQ
SKNLQSIL
Secondary structure LLLLLLLLLLLLEELLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLHHHHHHLLEEEEEEL
LLLHHHLL
PRMN -
PiMo -